Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca1g04478 ATGAGTCCAGAAATGGAAGATTTGAAAATGCATGAGTATGTAGGAGATGTGTGGTCACTGGGAGTGTTAATGTTGGAATGCTTTTTGGGCTATTTTCCTTTGATTGGACCAGAGCAGAGAACAGATTGGGAAACTTTGATTTGGGCAATTTGTTTTGGTGAGATGCTTGAGATGCCAAAATAG 183 0.3989 MSPEMEDLKMHEYVGDVWSLGVLMLECFLGYFPLIGPEQRTDWETLIWAICFGEMLEMPK. 61
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca1g04478 60 Gene3D Transferase(Phosphotransferase) domain 1 1 57 - -
Seca1g04478 60 ProSiteProfiles Protein kinase domain profile. 1 60 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca1g04478 60 SUPERFAMILY Protein kinase-like (PK-like) 1 56 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca1g04478 Seca-Chr1 146014615 146014797 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca1g04478 1 60 MAP Kinase Kinase Gene Family AT1G18350 48.438 7.43e-16 67.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca1g04478 K20604 - gmx:100817973 86.6557