Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca1g04384 ATGGAAAATGTGACAATAAGAAGTTCAAGTAGTCAAGCAAAGGTGTTGGGTACGGTAGTGTCAATATCAGGAGCATTTGTAGTGACTCTCTACAAAGGACCAGCGATCATCATTTCTCATAAACCATCCTTCTCACTATTTCCTCAATCAACTAACACTCTCAAATCGGTGGATCCAAGTTGGGCCATCGGTGGCCTTCTACTGACAGCTGAGTATATACTGGTTCCATTATGGTACATTGTACAGGTGCAAATCATGAAGGTGTACCCTGATGAACTAACGGTAGTCTTCTTTTACAACTTATGTGTCACCATCATGGCTGCAATTGTAGGTGTGATTACTGAGACAAATGCAAGTGCCTGGAAAATACGACCAGATACAGCATTGGCTTCCATCGTTTGCTCTGGAATTTTCGGATCATTCTTGAATAACGCAGTTCACACATGTGTTCTACGTATAAAGGGGCCAGTTTATGTAGCAATGTTCAAACCCCTCTCAATTGCCATCGCTGTTGCCATGGGAGTCATGTTCATTGGTGATACTCTCCACCTTGGAAGCCTAGTTGGAGCCGCAATAATATCGATTGGGTTTTATACAGTAATGTGGGGTAAAGCAACAGAAGAGGTGGATGATGTTGATGTCCCTAGCCAGGAATCATCAACAACAGCAGAGAATGTTCCTCTCTTGCAAAGCTATAAAACTAATAGAGATGAAAAGAAAACGCATGCGAGTGTATAA 738 0.4214 MENVTIRSSSSQAKVLGTVVSISGAFVVTLYKGPAIIISHKPSFSLFPQSTNTLKSVDPSWAIGGLLLTAEYILVPLWYIVQVQIMKVYPDELTVVFFYNLCVTIMAAIVGVITETNASAWKIRPDTALASIVCSGIFGSFLNNAVHTCVLRIKGPVYVAMFKPLSIAIAVAMGVMFIGDTLHLGSLVGAAIISIGFYTVMWGKATEEVDDVDVPSQESSTTAENVPLLQSYKTNRDEKKTHASV. 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca1g04384 245 SUPERFAMILY Multidrug resistance efflux transporter EmrE 118 204 - -
Seca1g04384 245 MobiDBLite consensus disorder prediction 215 232 - -
Seca1g04384 245 MobiDBLite consensus disorder prediction 212 245 - -
Seca1g04384 245 PANTHER WAT1-RELATED PROTEIN 1 218 IPR030184 GO:0016020|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca1g04384 Seca-Chr1 138155840 138157954 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca1g04384 1 236 Nodulin-like Gene Family AT3G28050 55.466 4.46e-88 263
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca1g04384 - - gmx:100814137 384.8