Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca1g04380 ATGGAGAAGGTGGCTTTAAGAAGCTCAGGTAGTCAGGCCAAAATCTTGGGTTCTATGGTATCAATATTAGGTGCACTCATAATTGTTTTCTATAAGGGCTTTACAATCTTACCAGCTCCTTCATCTCCCCTACTATCACCTACTGTTGTCTCCACATCATCACAAACAAATTGGGTTCTTGGCAGTTCTCTACTTGTCATTGAGTTTCTTCTGGTTCCAATTTGGTACATTATTCAGACCAATGTCATAAAAGAATATCCAGCAGAAGTTATTGTGGTGTTCTTATACAACCTATGCGGGACACTCATATCTGTACCACTATTCTTACTATTAGAAGCAAACTTAAGTTCTTGGAAAATAAATCCTGATATAAGAATGATCTCCATTCTATACTCGGGATTCTTTTGCACAGGCCTAAGTTGTTTGGTTCACACTTGGGGTCTTCATCTCAAAGGCCCTGTATTTATATCACTCTTTAAGCCTCTATCAATAGCCATTGCTGCTGCTATGAGTGCTATACTCCTTGGTGATGCACTGTATTTTGGGACTGTTGTTGGAGCAGTAATACTATCAATTGGGTTTTATGCTGTTATGTGGGGGAAAGCAAAAGAAGAAGAACTGAGTGAGGGCTATGACATAGCTCGACCTCCATCCAATAGCAAGACTCCTTTGTTGCAGAGCTCCAATGTGAAAGATAACGGAGAAATCATGTATACCGATAGTTGA 726 0.3981 MEKVALRSSGSQAKILGSMVSILGALIIVFYKGFTILPAPSSPLLSPTVVSTSSQTNWVLGSSLLVIEFLLVPIWYIIQTNVIKEYPAEVIVVFLYNLCGTLISVPLFLLLEANLSSWKINPDIRMISILYSGFFCTGLSCLVHTWGLHLKGPVFISLFKPLSIAIAAAMSAILLGDALYFGTVVGAVILSIGFYAVMWGKAKEEELSEGYDIARPPSNSKTPLLQSSNVKDNGEIMYTDS. 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca1g04380 241 Pfam EamA-like transporter family 64 198 IPR000620 GO:0016020
Seca1g04380 241 SUPERFAMILY Multidrug resistance efflux transporter EmrE 101 203 - -
Seca1g04380 241 PANTHER WAT1-RELATED PROTEIN 1 212 IPR030184 GO:0016020|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca1g04380 Seca-Chr1 138048963 138050304 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca1g04380 1 234 Nodulin-like Gene Family AT5G40240 50.840 2.20e-79 241
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca1g04380 - - gmx:100805667 318.546