Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca1g04379 ATGGCAAGGAGGCATTGTTACAAGGACGTTGTTCCATTCACCGCAATGGTTGCAGTAGAGTGTACCAACGTTGGTGTCAACGTTCTATTCAAAGCAGCTACGCAGAAGGGGTTGAGTTACTATGTCTTCATCGCTTATTCATTTGCAGTCTCCACTCTTGTTCTCCTTTTGCCTCTGCCCTTCTTTCTTCGATGGTCAAGAGGGCTTCCCCCGTTGAAGGCGTCTCTCATCTTCAGGATTTTCCTCCTTGGTGTGATTGGACTTGTAGCTCAGCTTTGTGGATATAAAGGACTTCAATATAGTTCACCGACTCTTGCTTCTGCTCTTAGCAATCTTATACCGGCTTTTACCTTCATCCTAGCTGTCTTTTTCAGGTGCTCATCTTTCTTATCTTCAAAACTATACCAAAATCATTTTGCTTCTCAAACATGA 432 0.4352 MARRHCYKDVVPFTAMVAVECTNVGVNVLFKAATQKGLSYYVFIAYSFAVSTLVLLLPLPFFLRWSRGLPPLKASLIFRIFLLGVIGLVAQLCGYKGLQYSSPTLASALSNLIPAFTFILAVFFRCSSFLSSKLYQNHFASQT. 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca1g04379 143 PANTHER WAT1-RELATED PROTEIN 9 124 IPR030184 GO:0016020|GO:0022857
Seca1g04379 143 Pfam EamA-like transporter family 25 124 IPR000620 GO:0016020
Seca1g04379 143 SUPERFAMILY Multidrug resistance efflux transporter EmrE 47 124 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca1g04379 Seca-Chr1 138042857 138043786 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca1g04379 1 125 Nodulin-like Gene Family AT5G40240 61.600 2.09e-43 144
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca1g04379 - - gmx:100805667 209.534