Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Seca1g04377 | ATGCACGGGGAATTTGATCCCGCTGTTCTGGCCTCTTTGCCCCCATCAATGCAACTGGACCTCCTTGTTCAGATGAGAGAGCGATTGATTGCAGAGAACAGACAAAAGTATCAGAAAGTCAAGAAGGATCCTGCAAAATTCTCTGAGCTACAAATACAAGCTTACCTTAAAACTGTTGCTTTCCGACGCGAAATAGATGAAGTGCAGAAAACTGCTGTTGGAGGAGGAGTAGGTGGTGTACAGACATCGCGGATTGCATCTGAAGCCAACCGGGAATATATATTCTCATCATCTTTTACTGGTGACAAACAAGAACTTACCTCCACCAGATTAGAGAAAAATAAAGAAGATAAAAACCAAAAGTCACAAGGAACACATTCTTCACAGAATTTTACAAATAGCATTGCAGCAGGCAGTGATTCTAATAATTCAGGTGGATTGATTTCCAGTGAACCGGGTGAGCCTGTTGATGAAAGTATTCAGACATATCTAGATGAGAGGGGTCGATTTCGAGTTAGTAGATTGAGAGCTATGGGGATGCGTATGACCCGTGATATTCAAAGGAATTTGGATTTGATGAGGGAGATTGAGCAGGAAAGAACATTTGTCAACAAGGCAGCAATTATTGAAACTCTGCTAAATGCAGAGAATAATGGTACATCAGAATGTTCCGGGAACCAGCATATAGGTAAATCACAAGAGGTGAATGTTGACTTAGTTGGAGAAAATGTGCAAAATGAGCAATCAAAGCTTGATGGGGATACTTCTATAGAGGTATCCTTTGAATATGATTGCAAGAATAAGCTTGTAAGTGGTGAGGATGATATATTTGCCAGTTTAGTAGGAGGAAATCCAGTGACACTCTTTTATGCTGATGACACTGCAGCAAAAGTGCAACCTTCTGGTTCTGATTCAGATTGTGATTGGGAAGAAGGCCCTGTTCAAGGCAGGAACACCATTTTTCCTGGACATAATAATATGGAATTGAAGTCTTCTGTTGCAGATGAAAATATTAATAATATTAATAATGAAAGTGAAATAGAATGGGAGGAAGGAGATTGTGATGGTGCTAAAAGCCCCTTAGTGTGTCCAGCTGAGTCAAGAAAATTGGCATCTCGAGGGCACTTGGAGGAGGAGTCTGATTTGCAAGAGGCAATAAGGAGAAGTCTTGAGAATACAGGGGATCAGAAACTTAAATGCATGTCAACCTTAGATGAGCATTCAAATTCTTATGAGAACAAATTGGACTCTGAATTAGAACATGGTGATAATCTGTATTGTTCTGGTCCAATGGATTTAAATGACAACAGTATGGGTGGTTCCACTTTGCCTAGGAAAGGTGGTACTGAACAAAATGAATTACATGAAATTGTAGATGGAGATAAAATACATGATTATGTTACTAAAAATAACCCACAGACTTTCCATTTGCGTGGAAGTCAGTCAAAGTCACCTGTGACATTTAATTCCAATAAAACAGAGATATTGATTGACAGACCTTACAGACTGGATATATGCACTTGTTCTGAAGATTCAATGTCAGATGCAAATGTCACAACGAAGGATGAGGTTCCAATGGTTGCAAAGCAATCGTTGTCCAAGGTTGATCCACTTGGCGTGACTGAAGAGGAGAAGAACTATATTAATGATTCTGAACTCTTGAGTAATTCTACTGACAATACAAAGCCTTCTATTCTTTTGATGGAGTCATCCTTGAAAGGATCTACAGAAGGCCTTGATATTGAGCCAAAATTTCCTTCAGTGGACAATGATGGAAATTTATCTGAGGAAAGGGATAGTAACCTTGCCAAAGATGCAGTGAACACCCCAGGAGATTTCCCTGCACAGTTAGCTGAGATTAGATTGGAGGATGAAATGGAAATTCTTGACAGAGAATATATCAACCTGGAAAATGAACAGAGGAAGCTTGAGCGTAATGCAGAATCTGTTAACAGTGAATTATTCACAGAATGTCAGGAACTACTGCAAATGTTTGGCTTGCCATATATTATTGCTCCAATGGAAGCTGAAGCACAGTGTGCTTACTTGGAACTTGCAAAACTAGTTGATGGTGTTGTTACTGATGACTCTGATGTCCTTTTATTTGGGGCACGCAGTGTTTATAAGAATATATTTGATGACCGCAAATATGTAGAGACATACTTCATGGAGGACATTGAAAAGGAGCTTGGAATGACCAGAGAAAAATTAATTCGCATGGCACTACTTCTTGGGAGTGATTATACTGAAGGTGTAAGTGGGATTGGCATTGTTAATGCTATTGAGGTTGTAAATGCATTCCCTGAGGAAGATGGCCTCCTGAAATTCCGGCAGTGGGTTGAGTCACCAGATCCAACCATCCTAGGACGGTTGGATGCAAAAAATAGATCCAATACCAGAAAGAAAGGGTCAAAAGTTAAAGAAAAGATAAATACGTCAAATTGCATTATTGAAGAGTCTGTATCAGACCAGAACATCTCCCATACTCAGGAGCAAAAGGAGTTGCCTGATTACATCCAAGAAATGAAGCAAACTTTCATGGACAAGCATAGAAATGTTAGCAAGAATTGGCATATTCCTCCTTCTTTTCCATGTGAAGTAGTTATATCTGCTTACCATTCTCCACAAGTTGACAAGTCAACCGAGCCTTTCTCGTGGGGAAAGCCAGACCATCTTGTTCTTCGCAAATTGTGCTGGGAGAAATTTGGGTGGACTAGCCAGAAAGCAGATGAGTTGCTATTACCTGTTTTAAAGGAATATAACAAACATGAGACTCAACTGCGGTTGGAAGCATTTTACAGTTTCAATGAAAGATTTGCAAAAATTCGTAGCAAGAGAATTAAGAAAGCAGTAAAAGGAATTACTGGTAAGCAGAATTCAGATTTAATAGATGATTCTGCAGAAAACTTGTCCAAGAGTAGGAAGAACAAGAGAGGAAGTTCTGTTGAACCTGGGGATAACAAATTGGAGACTTCAGAAGGAACAGAGGAAAGTCTAGCAGGTAGGAAGAAATCAAAAACGGAAGAGTCAACTAAAAGGAAGAATGATGGGGATACTGTAGCTAAGGTACAGTCAAAGAAAAAGAAAATCAATGATGATCCTTCTTCAGCACCTGGTACATCTGCGGTGGAGAATTTACAGCCATGCGTGCAAACCAAAGAAGAGCAATGTGATGGCAAGGCATTGGTTTGTAATAAAAGTGCCAGAGGCAGAGGCATAGGAGTAAAAAGAGGAAGGAAAAAGAAAATTCTCCGTTTTCAATCATGTGAAACTGAAACATCATCTAGTAGTACTGACATCAATGATCATGGGCCAAGAGTTCAAGTTGATATGTCAAAAGCTCCAGAAGTCGTGCGAAGGTCAATGCGATCTCGGAAACCTGTCAAATATTCTTTCCAGGACCTTGAAATTGAAGATGCTGTTGATTCATTTGATCAGAGCATTCAGACATGCTTGGGTGAAGATCCAATAGATGAAAAATTATCCCACATTTATGGTGTATGTGGAGATGGTGCAACTGATTTCAGCAGAGGGAAAGAAAGCAGTATACTAAATCCTCCTCTAAAAGAGAACTTGCCTAAAGATTATCTTGAGTCAGAAGGTCGGTTTTGCATTGATGGTGGTGAAACTAGTCATCCAGGGACGGGCAATCGTGATAATTCTTTTGATTCTGACCCTTCTAATGTCTACCTTAAAATGGGAGGTGGATTCTGTTTAGATGATAGTGAGATAAGTAACGACCATAATGCAAGTGATGATATGAACACTGCTACAATGGATTATACTGCAGATATACCACAGAATTCTGATTTTTTGGATGAAACTGACTGTGCTAAAAACAGCTCAGATTTATTGTTTTCTAGTGTCGAAAAAGCTGGAAATGAGATACAAGATGGAGGGGCGTCTCCTAAAATCAATAAAGAGGCGAATGACAACCTTCCAAATGCTAGTAGTTATGATCATTCTGACATAGGGGTCTTGATACCAGAGAATGCTCGTCATGATAGTGGGACCTCCACCTCCACCTCCACGGGGGCTTTTAGTGCTATGCCTTTTTTGAGGAAAAGAAGGAAGAACTGA | 4080 | 0.398 | MHGEFDPAVLASLPPSMQLDLLVQMRERLIAENRQKYQKVKKDPAKFSELQIQAYLKTVAFRREIDEVQKTAVGGGVGGVQTSRIASEANREYIFSSSFTGDKQELTSTRLEKNKEDKNQKSQGTHSSQNFTNSIAAGSDSNNSGGLISSEPGEPVDESIQTYLDERGRFRVSRLRAMGMRMTRDIQRNLDLMREIEQERTFVNKAAIIETLLNAENNGTSECSGNQHIGKSQEVNVDLVGENVQNEQSKLDGDTSIEVSFEYDCKNKLVSGEDDIFASLVGGNPVTLFYADDTAAKVQPSGSDSDCDWEEGPVQGRNTIFPGHNNMELKSSVADENINNINNESEIEWEEGDCDGAKSPLVCPAESRKLASRGHLEEESDLQEAIRRSLENTGDQKLKCMSTLDEHSNSYENKLDSELEHGDNLYCSGPMDLNDNSMGGSTLPRKGGTEQNELHEIVDGDKIHDYVTKNNPQTFHLRGSQSKSPVTFNSNKTEILIDRPYRLDICTCSEDSMSDANVTTKDEVPMVAKQSLSKVDPLGVTEEEKNYINDSELLSNSTDNTKPSILLMESSLKGSTEGLDIEPKFPSVDNDGNLSEERDSNLAKDAVNTPGDFPAQLAEIRLEDEMEILDREYINLENEQRKLERNAESVNSELFTECQELLQMFGLPYIIAPMEAEAQCAYLELAKLVDGVVTDDSDVLLFGARSVYKNIFDDRKYVETYFMEDIEKELGMTREKLIRMALLLGSDYTEGVSGIGIVNAIEVVNAFPEEDGLLKFRQWVESPDPTILGRLDAKNRSNTRKKGSKVKEKINTSNCIIEESVSDQNISHTQEQKELPDYIQEMKQTFMDKHRNVSKNWHIPPSFPCEVVISAYHSPQVDKSTEPFSWGKPDHLVLRKLCWEKFGWTSQKADELLLPVLKEYNKHETQLRLEAFYSFNERFAKIRSKRIKKAVKGITGKQNSDLIDDSAENLSKSRKNKRGSSVEPGDNKLETSEGTEESLAGRKKSKTEESTKRKNDGDTVAKVQSKKKKINDDPSSAPGTSAVENLQPCVQTKEEQCDGKALVCNKSARGRGIGVKRGRKKKILRFQSCETETSSSSTDINDHGPRVQVDMSKAPEVVRRSMRSRKPVKYSFQDLEIEDAVDSFDQSIQTCLGEDPIDEKLSHIYGVCGDGATDFSRGKESSILNPPLKENLPKDYLESEGRFCIDGGETSHPGTGNRDNSFDSDPSNVYLKMGGGFCLDDSEISNDHNASDDMNTATMDYTADIPQNSDFLDETDCAKNSSDLLFSSVEKAGNEIQDGGASPKINKEANDNLPNASSYDHSDIGVLIPENARHDSGTSTSTSTGAFSAMPFLRKRRKN. | 1360 |
Showing 1 to 1 of 1 entries
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Seca1g04377 | 1359 | MobiDBLite | consensus disorder prediction | 967 | 1033 | - | - | |
| Seca1g04377 | 1359 | Coils | Coil | 619 | 653 | - | - | |
| Seca1g04377 | 1359 | SMART | xpgineu | 663 | 732 | IPR006086 | GO:0004518 | |
| Seca1g04377 | 1359 | ProSitePatterns | XPG protein signature 2. | 666 | 680 | IPR019974 | GO:0016788 | |
| Seca1g04377 | 1359 | MobiDBLite | consensus disorder prediction | 106 | 122 | - | - | |
| Seca1g04377 | 1359 | MobiDBLite | consensus disorder prediction | 1333 | 1348 | - | - | |
| Seca1g04377 | 1359 | SMART | HhH_4 | 734 | 767 | IPR008918 | GO:0003677|GO:0003824 | |
| Seca1g04377 | 1359 | MobiDBLite | consensus disorder prediction | 105 | 155 | - | - | |
| Seca1g04377 | 1359 | Pfam | XPG I-region | 666 | 747 | IPR006086 | GO:0004518 | |
| Seca1g04377 | 1359 | SUPERFAMILY | PIN domain-like | 635 | 747 | IPR029060 | - |
Showing 1 to 10 of 25 entries
Duplication type information
Functional genes information
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Seca1g04377 | K10846 | - | gmx:100820295 | 1854.72 |
Showing 1 to 1 of 1 entries