Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca1g04370 ATGGATCTAGAGTCTGTGATTTACAGAAACTCAATTAAGGAGGAATCATGGAGGACAGTGTTAACTTTAGCTTATCAGAGCTTGGGAGTTGTCTATGGAGATTTGAGCACATCCCCACTTTATGTTTACAAAAGCACGTTTGCTGAGGACATTCAACATTCAGAGACAAATGAAGAAATATATGGGGTCTTGTCTTTTGTGTTCTGGACCCTTACACTGATTCCACTCCTCAAGTATGTGTTCATTGTGCTTAGAGCAGATGATAATGGTGAAGGAGGAACTTTTGCTCTGTATTCACTGCTATGCCGGCATGCCAAGGTAGGATTGTTGCCTAATATTCAGCAAGCAGATGAGGAATTAACTGAATACACTAAAGATGGAACAGTGCCAATCGATAAGAAAAATGTTGGGTTGGTCTTGAAATCCATGTTGGAGAAGCACAGCGTGCTGCAGAGGGTGCTGCTTGTTCTGGCTTTGATAGGAACTTGCATGGTTATTGGGGATGGTGTTCTTACTCCTGCACTTTCTGTTTTCTCTGCTGTATCTGGTTTGGAGCTTTCCATGTCTAAAGAGCAGCACCGATATGTTGAAGTCCCAGTTGCTTGTGTAATACTGGTATTTTTGTTTGCGCTTCAACATTATGGGACCCATCGTGTGGGATTTTTATTTGCACCTGTTGTGATGACCTGGCTGCTATGCATCAGTGCTATTGGTTTGTATAATATCTTGCATTGGAACCCGCATGTTTATGAAGCTCTCTCTCCATACTACATGTTCAAATTTCTGAAGAAGACTCAAAGGGGAGGTTGGATGTCCTTGGGTGGGATTCTACTCTGTATAACGGGTTCTGAAGCTATGTTTGCTGATCTAGGACACTTTTCACAGTTGTCAATTAAGATTGCTTTTACATGTTTGGTATACCCTTCTTTAATCCTGGCATATATGGGACAAGCTGCGTATCTATCCAAGCATCATGCTATTGAAAGTGATTACCGAATTGGGTTCTATGTATCTGTACCTGAGAAAATTAGATGGCCTGTTCTTGTAATAACCATACTTCAAGCTGTGGTTGGAAGTCAAGCTATCATCACAGGTACTTTCTCAATAATCAAACAATGTTCTGCCATGGGATGCTTCCCCAAAGTCAAGATCATTCATACATCATCAAAGGTACATGGCCAGATTTATATTCCAGAGATCAACTGGTGCTTGATGCTACTTTGCCTGGCCATTACTGTTGGATTTAGAGATACAAAAAGAATGGGGAATGCATCAGGGTTGGCTGTCATAACTGTCATGCTGGTGACCACTTGCCTAATGTCTCTAGTTATAGTCTTATGCTGGCATAAAAGTGTTTTCCTAGCCATATGCTTTATATTCTTCTTTGGCTCCATTGAGGCACTCTACTTCTCTGCATCACTCATCAAGTTCCTTGAAGGGGCTTGGGTCCCCATTGCCCTCTCTTTCATCTTTCTCATTATCATGTGTGTGTGGCACTATGGCACACTCAAGAAGTATGAGTTTGATGTTCAAAACAAGGTGTCCATCAACTGGCTCCTTGGTTTGGGACCCACTCTAGGAATTGTGAGGGTTAAGGGAATTGGCCTCATACATACAGAACTTGTATCTGGGATCCCAGCTATTTTCTCTCATTTTGTTACCAATCTGCCAGCTTTTCATCAAGTTGTAGTCTTCCTTTGCATCAAATCTGTTCCAGTTCCACATGTCAGACCTGAAGAAAGGTTCTTGGTAGGTAGAGTTGGACCAAAGGAATATAGGCTTTATAGGTGCATAGCAAGGTATGGCTATCGTGACATTCACAAGGATGATGTTGAGTTTGAGAAAGATCTTATCTGTAGTATAGCAGAATTCATACGCTCAGATACTTCAGATCATGGCCTAGGATTTGAGAGTTTTGAAGATGATACAAAGATGACAGTTATTGGAACTTCATCATCAAACTCAGAAGGTGTAAGGATGTGTGAAGATGATCAAGATATTTCTCAATTGGAAGGTGCTTCAGAACTGAGGGAAGTTAAGTCTCCTAAAAAAGTGAAGAAGAGAGTGAGGTTTGTTGTGCCAGATAGTCCACAGATTGATTTGGAAGCAAGGAAGGAATTGCAGGAGCTAATGGAAGCAAGGGATACAGGAATGGCATTTATAATGGGTCACTCATATGTGAAAGCAAAAAGAGGATCAAGTTGGATAAAGAAAGCTGTTATCAATTATGGGTATGATTTCTTAAGGAGAAATTCTAGAGCACCAACTTATGCTCTAAGTATCCCTCATGCATCTACCCTAGAGGTGGGAATGATCTATCATGTCTAG 2328 0.4111 MDLESVIYRNSIKEESWRTVLTLAYQSLGVVYGDLSTSPLYVYKSTFAEDIQHSETNEEIYGVLSFVFWTLTLIPLLKYVFIVLRADDNGEGGTFALYSLLCRHAKVGLLPNIQQADEELTEYTKDGTVPIDKKNVGLVLKSMLEKHSVLQRVLLVLALIGTCMVIGDGVLTPALSVFSAVSGLELSMSKEQHRYVEVPVACVILVFLFALQHYGTHRVGFLFAPVVMTWLLCISAIGLYNILHWNPHVYEALSPYYMFKFLKKTQRGGWMSLGGILLCITGSEAMFADLGHFSQLSIKIAFTCLVYPSLILAYMGQAAYLSKHHAIESDYRIGFYVSVPEKIRWPVLVITILQAVVGSQAIITGTFSIIKQCSAMGCFPKVKIIHTSSKVHGQIYIPEINWCLMLLCLAITVGFRDTKRMGNASGLAVITVMLVTTCLMSLVIVLCWHKSVFLAICFIFFFGSIEALYFSASLIKFLEGAWVPIALSFIFLIIMCVWHYGTLKKYEFDVQNKVSINWLLGLGPTLGIVRVKGIGLIHTELVSGIPAIFSHFVTNLPAFHQVVVFLCIKSVPVPHVRPEERFLVGRVGPKEYRLYRCIARYGYRDIHKDDVEFEKDLICSIAEFIRSDTSDHGLGFESFEDDTKMTVIGTSSSNSEGVRMCEDDQDISQLEGASELREVKSPKKVKKRVRFVVPDSPQIDLEARKELQELMEARDTGMAFIMGHSYVKAKRGSSWIKKAVINYGYDFLRRNSRAPTYALSIPHASTLEVGMIYHV. 776
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca1g04370 775 Pfam K+ potassium transporter 25 605 IPR003855 GO:0015079|GO:0016020|GO:0071805
Seca1g04370 775 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 13 774 IPR003855 GO:0015079|GO:0016020|GO:0071805
Seca1g04370 775 NCBIfam potassium uptake protein 23 775 IPR003855 GO:0015079|GO:0016020|GO:0071805
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca1g04370 Seca-Chr1 137780084 137787232 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca1g04370 1 773 Inorganic Solute Cotransporters AT5G14880 77.279 0.0 1224
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca1g04370 K03549 - gmx:100793387 1382.85