Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Seca1g04297 | ATGTGGTCTGTGGGTTGTGTGCTTTCTGAGCTGCTCCTGGGACAGCCTCTGTTGCCTGGAGAAAGTGGAGTTGATCAACTTGTTGAAATTATCAAGGTACTTGGGACACGAACTCGTGAGGAAATAAAATGCATGAATCCAAATTACACAGAGTTTAAGTTCCCTCAAATCAAGGCTCACCCCTGGCATAAGATATTCCATAAGCGAATGCCCCCAGAAGCAGGAGATCTTGTTTCAAGACTTCTTCAATATTCTCCAAATTTACGATGCACTGCTTTGGAAGCATGTGTCCACCCATTTTTTGATGAACTCCGTGATCCAAACACCCGTCTCCCTAACGGCCGCCCTATGCCGCCCCTCTTTAATTTCAAACCTCAAGAGCTGAAGGGAGTAACTTTGGAGCTGCTATGCAAACTTGTTCCAGAACATGCCCGGAAGCAGTGTCCATCCCTTAATTTCTAG | 462 | 0.4589 | MWSVGCVLSELLLGQPLLPGESGVDQLVEIIKVLGTRTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEAGDLVSRLLQYSPNLRCTALEACVHPFFDELRDPNTRLPNGRPMPPLFNFKPQELKGVTLELLCKLVPEHARKQCPSLNF. | 154 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Seca1g04297 | 153 | Pfam | Protein kinase domain | 1 | 101 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Seca1g04297 | 153 | Gene3D | Transferase(Phosphotransferase) domain 1 | 1 | 145 | - | - | |
Seca1g04297 | 153 | ProSiteProfiles | Protein kinase domain profile. | 1 | 101 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Seca1g04297 | 153 | PANTHER | GLYCOGEN SYNTHASE KINASE-3 ALPHA | 1 | 147 | - | - | |
Seca1g04297 | 153 | SUPERFAMILY | Protein kinase-like (PK-like) | 1 | 126 | IPR011009 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Seca1g04297 | Seca-Chr1 | 134992298 | 135001870 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Seca1g04297 | 1 | 109 | Core Cell Cycle Gene Families | AT1G20930 | 35.398 | 5.93e-15 | 68.6 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | CMGC_GSK | Seca1g04297 | Pkinase | 1.9e-11 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Seca1g04297 | K00924 | - | mnt:21403420 | 293.123 |