Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca1g04263 ATGGAGAAGAAAATAAATTATCAAGGACAAGACTTTCGATCTATACCATTTGGTTTTGGTCGTAGAGGTTGCCCTCTGTTTCAATTGGGTTTGATTACTGTTAGGCTAGTTATAGCTCAATTGGTTCATTGCTTTAATTGGAACCTTCAACCAAATGTTAGTCTTGCCAACTTGAATATGGAAGAGAAATTTGGGCTCTCAATTCCAAGAGCTCAACAATTGCTTGCAATACCAACTTATCGTTTGACCAGCAATGCTAGGCGTGAGTAG 270 0.3852 MEKKINYQGQDFRSIPFGFGRRGCPLFQLGLITVRLVIAQLVHCFNWNLQPNVSLANLNMEEKFGLSIPRAQQLLAIPTYRLTSNARRE. 90
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca1g04263 89 PANTHER CYTOCHROME P450 93A3-LIKE 2 83 - -
Seca1g04263 89 SUPERFAMILY Cytochrome P450 8 81 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca1g04263 89 Pfam Cytochrome P450 5 71 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca1g04263 89 Gene3D Cytochrome P450 2 84 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca1g04263 Seca-Chr1 132513586 132513855 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca1g04263 6 82 Monolignol Biosynthesis Gene Families AT4G36220 45.455 9.21e-22 85.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca1g04263 - K20562 psat:127113357 124.79