Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca1g04261 ATGAGGAAACTATACACCTTACAACTTTTTAGCACTTCAAAAGTTGAGCTTTTTGCTCCTATTAGAAGGGAGAAGCTACGTCTTGTGGTAAAGTCACTAGAAAAAGTTGCAGGGGTGGGTCAAATTGTGAACCTTAGTGAGGTTGTTGAGAACCTTATGGAGGATACAATGTATAAGATGATACTGGGTCATAATAGGAATGAGCAATTTGACTTAATGGGATCAATTAATGAAGCAGTGACAATGATTGGAGCTTTCAATCTGGCAGATTATGTGCCTTGGCTAGTCTTATTTGATCTTCAGGTTGTTTTCCTAGATATGATTTTGGGGGCAACTGAAACATCTGCTACTGCGATTGAGTGGGCATTATCAGAACTTTGGAGGTATCCAAGGGTAATGAAAATCCTTCAAGATGAGATTGAAAATGAAATAGGAATTACGAGAATGGTGGAAGAGGAGGATTTGATGAAATTAAGTTATTTGGATATGGTAGTGGATGAGACCTTAAGACTACATCATGTTGCAGCCTTAATCTCTCGAGAATCTAGAGAGAACATCACAATTGATGGTTATTATATAAAGAAAAAATCACGAATGATAATAAATGCATGGGCGATAGGGAGGGATCCTAATGTGTGGTCGGATAATGCTGAAACATTTCTTCCAAAGAGATTTATGGAGAAGAAAATAAATTATCAAGGACAAGACATTCGATCTATACCATTTGGTTATGGTCATAGAGCTTGTGTAACATCCAATTAA 762 0.3701 MRKLYTLQLFSTSKVELFAPIRREKLRLVVKSLEKVAGVGQIVNLSEVVENLMEDTMYKMILGHNRNEQFDLMGSINEAVTMIGAFNLADYVPWLVLFDLQVVFLDMILGATETSATAIEWALSELWRYPRVMKILQDEIENEIGITRMVEEEDLMKLSYLDMVVDETLRLHHVAALISRESRENITIDGYYIKKKSRMIINAWAIGRDPNVWSDNAETFLPKRFMEKKINYQGQDIRSIPFGYGHRACVTSN. 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca1g04261 253 Gene3D Cytochrome P450 101 253 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca1g04261 253 PRINTS P450 superfamily signature 110 127 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca1g04261 253 PRINTS P450 superfamily signature 240 249 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca1g04261 253 PRINTS P450 superfamily signature 163 174 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca1g04261 253 PANTHER CYTOCHROME P450 93A3-LIKE 1 102 - -
Seca1g04261 253 Pfam Cytochrome P450 100 250 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca1g04261 253 Gene3D Cytochrome P450 1 100 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca1g04261 253 PRINTS E-class P450 group I signature 119 145 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca1g04261 253 PRINTS E-class P450 group I signature 162 180 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca1g04261 253 PRINTS E-class P450 group I signature 239 249 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca1g04261 253 PRINTS E-class P450 group I signature 99 116 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca1g04261 253 SUPERFAMILY Cytochrome P450 1 250 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca1g04261 Seca-Chr1 132481650 132482918 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca1g04261 1 249 Cytochrome P450 AT3G26330 32.075 6.37e-48 164
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca1g04261 - K20562 psat:127113357 261.151