Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca1g04258 ATGGCATTTTCTGAGTATGGTCCATACTGGCGTAGCATGAGGAAACTATGCACCTTACAACTTCTTAGCACTTCAAAAGTTGAGCTTTTTGCTCCTATTAGGAGGGAGAAGCTACGTCTTGTGGTAAAGTCAATAGAAAAAGTTGCACTGGTCGGTCTAATTGTGAACCTTAGCGAGGTTTTTGAGAACCTTATGGAGGATATAATGTATAAGATGATACTGGGTCATAATAGGAATGAGCAATTTGACTTAATGGGATCAATTCATGAAGCAGTGAAAATGATTGGAGCTTTCAATCTGGCAGATTATGTGCCTTGGCTTGCCGTATTTGATCTTCAGGGATTAAAACGAGGCTGCAAGAAAACCATTAAAGCACTTGATGAGGTGATGAAAAAGATAATAACAGAGCATGAACAAGCTGCTAATTTTGGCACAAGGAATCATAAAGACTTTGTAGACATTCTACTCTCAAAGATGCACCAAACCATTGATTCCCAAAGTGAACAAAATCACATCATTAATCGAACTAGCATCAAGGTTGTTTTGCTAGATATGATTTTGGGGGCAACTGAAACATCTGCTACTGCGATTGAGTGGGCACTATCAGAACTTTTGAGGCATCCAAGGGTAATGAAAATCCTTCAAGATGAGATTGAGAATGAAATAGGAATTACAAGAATGGTGGAAGAGGAGGATTTGATGAAATTAAGTTATTTGGATATGGTGGTGGATGAGACCTTAAGAATACATCCTGTTGCAGCCTTAATCCCTCGAGAATCTAGAGAGAACATCACAGTTGATGGTTATTATATAAATAAAAAATCACGAATGATAATAAATGCATGGGCAATAGGGAGGGATCCTAATGTGTGGTCGGATAATGCTGTGAAACATTTCTTCCAGTGA 906 0.3841 MAFSEYGPYWRSMRKLCTLQLLSTSKVELFAPIRREKLRLVVKSIEKVALVGLIVNLSEVFENLMEDIMYKMILGHNRNEQFDLMGSIHEAVKMIGAFNLADYVPWLAVFDLQGLKRGCKKTIKALDEVMKKIITEHEQAANFGTRNHKDFVDILLSKMHQTIDSQSEQNHIINRTSIKVVLLDMILGATETSATAIEWALSELLRHPRVMKILQDEIENEIGITRMVEEEDLMKLSYLDMVVDETLRIHPVAALIPRESRENITVDGYYINKKSRMIINAWAIGRDPNVWSDNAVKHFFQ. 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca1g04258 301 Gene3D Cytochrome P450 1 298 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca1g04258 301 Pfam Cytochrome P450 2 293 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca1g04258 301 PRINTS E-class P450 group I signature 177 194 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca1g04258 301 PRINTS E-class P450 group I signature 240 258 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca1g04258 301 PRINTS E-class P450 group I signature 197 223 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca1g04258 301 SUPERFAMILY Cytochrome P450 3 293 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca1g04258 301 PANTHER CYTOCHROME P450 93A3-LIKE 1 294 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca1g04258 Seca-Chr1 132439714 132441156 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca1g04258 1 293 Monolignol Biosynthesis Gene Families AT4G36220 39.216 8.91e-63 205
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca1g04258 - - psat:127113357 403.29