Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca1g04253 ATGTCTTATGCAACAATAACAGTACATGCTTTCCTTCTTTTAACTTTCATATATTTTATACACACAATCTTCTTGTCTCCAAAACAAAGAAACATAGGTCGAAAAAAGCCACCAGGTCCACTAGCGCTACCAATTATCGGAAACCTCCACATGTTGGGCACCTTTCCACATCGCACACTTCATTCCCTGTCCAAAAAATATGGCCCTATCATGTCCTTAATGCTGGGACAAGTCCCAACTATTGTGATTTCCTCCTCGGAGGCTACCGAGTTATTCATCAAGACCCATGACACCATTTTTGCAAGCCGACCAAGGATTCAATCAAGTGAGCACTTGTTCTATGGCTCCAAGGGTGTGGCATTTTCTGAGTATGGTCCATACTGGCCTAACATGAGGAAACTATGCACCTTACAACTTCTTAGCACTTCAAAAGTTGAGCTTTTTGCTCCTATTAGGAGGGAGAAGCTACGTCTTGTGGTAAAGTCACTAGAAAAAGTTACAGTGGTGGGTCAAATTGTGAACCTTAGTGAGGTTGTTGAGAACCTTATGGAGGATATAATGAATGAGCAATTTGACTTAATGGGATCGGTTCATGAAGCAGTGAAAATGATTGGAGCTTTCAATCTGGCAGATTATGTGCCTTGGCTAGCCGTATTTGATCTTCAGGGATTAAAACGAGGCTGCAAGAAAACCATTAAAGCACTTGATGAGGTGATGGAAAAGATAATAACAGAGCATGAACAAGCTGCTAATTTTGGCACAAGGAATCATAAAGACTTTGTAGACATTCTACTCTCAAAGATGCACCAAACCATTGATTCCCAAAGTGAACAAAATCACATCATTAATCGAACTAGCATCAAGGCTGTTTTGCTAGATATGATTTTGGGGGCAACTGAAACATCTGCTACTGCTATTGAGTGGGCATTATCAGAACTTTTGAGGCATCCAAGGGTAATGAAAATCCTTCAAGATGAGATTGAGAATAAAATAGGAATTACGAGAATGGTGGAAGAGGAGGATTTGATGAAATTAAGTTATTTGGATATGGTGGTGGATGAGACCTTAAGACTACATCCTGTTGCAGCCTTAATCCCTCGAGAATCTAGAGAGAACATCACAATTGATGGTTATTATATAAAGAAAAAATCACGAATGATAATAAATGCATGGGCGATAGGGAGGGATCCTAATGTGTGGTCAGATAATGCTGAAACATTTCTTCCAGAGAGATTTATGGAGAAGAAAATAAATTATCAAGGACAAGACTTTCGATCTATACCATTTGGTTCTGGTCGTAGAGCTTGCCCTGGGATTCAATTGGGTTTGATTACTGTTAGGCTAGTTATAGCTCAATTGGTTCATTGCTTTAATTGGAACCTTCCACCAAATGTTAGTCCTGCCAACTTGAATATGGAAGAGAAATTTGGGCTCTCAATTCCAAGAGCTCAACAATTGCTTGCAATACCAACTTATCGTTTGACCAGCAATGCTAGGCATGAGTAG 1506 0.3977 MSYATITVHAFLLLTFIYFIHTIFLSPKQRNIGRKKPPGPLALPIIGNLHMLGTFPHRTLHSLSKKYGPIMSLMLGQVPTIVISSSEATELFIKTHDTIFASRPRIQSSEHLFYGSKGVAFSEYGPYWPNMRKLCTLQLLSTSKVELFAPIRREKLRLVVKSLEKVTVVGQIVNLSEVVENLMEDIMNEQFDLMGSVHEAVKMIGAFNLADYVPWLAVFDLQGLKRGCKKTIKALDEVMEKIITEHEQAANFGTRNHKDFVDILLSKMHQTIDSQSEQNHIINRTSIKAVLLDMILGATETSATAIEWALSELLRHPRVMKILQDEIENKIGITRMVEEEDLMKLSYLDMVVDETLRLHPVAALIPRESRENITIDGYYIKKKSRMIINAWAIGRDPNVWSDNAETFLPERFMEKKINYQGQDFRSIPFGSGRRACPGIQLGLITVRLVIAQLVHCFNWNLPPNVSPANLNMEEKFGLSIPRAQQLLAIPTYRLTSNARHE. 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca1g04253 501 Gene3D Cytochrome P450 24 491 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca1g04253 501 PRINTS P450 superfamily signature 297 314 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca1g04253 501 PRINTS P450 superfamily signature 350 361 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca1g04253 501 PRINTS P450 superfamily signature 427 436 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca1g04253 501 CDD CYP71-like 66 486 - -
Seca1g04253 501 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 429 438 IPR017972 GO:0005506|GO:0016705
Seca1g04253 501 PANTHER CYTOCHROME P450 93A3-LIKE 13 495 - -
Seca1g04253 501 FunFam Cytochrome P450 83B1 24 489 - -
Seca1g04253 501 Pfam Cytochrome P450 37 483 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca1g04253 501 SUPERFAMILY Cytochrome P450 37 493 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca1g04253 501 PRINTS E-class P450 group I signature 349 367 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca1g04253 501 PRINTS E-class P450 group I signature 64 83 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca1g04253 501 PRINTS E-class P450 group I signature 436 459 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca1g04253 501 PRINTS E-class P450 group I signature 426 436 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca1g04253 Seca-Chr1 132347298 132349139 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca1g04253 34 490 Cytochrome P450 AT3G26330 38.574 1.12e-116 351
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca1g04253 - - psat:127113357 681.404