Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca1g04250 ATGTCTTATGCAACAATAACAGTACATGCTTTCCTTCTTTTAACTTTCATATATTTTATATACACAATCTTCTTGTCTCCAAAACAAAGAAACGTAGCTCGAAAAAAGCCACCAGGTACCTTTCCACATCGCACGCTTCATTCCCTATTCAAAAAATATGGCCCTATCATGTCCTTAAAGCTGGGACAAGTCCCAACTATTGTGGTTTCCTCCTCAGAGGCTACCGAATTATTCATCAAGACCCATGACACCAGTTTTGCAAGCCGACCAAGGATTCAATCAAGTGAGCACTTGTTCTATGGCTCCAAGGGTATGGAATTTTCTGAGTATGGTCCATACTGGCGTAGCATGAGGAAACTATGCACCTTGCAACTTCTTAGCACTTCAAAAGTTGAGCTTTTTGCTCCTATAAGGAGGGAGAAGCTACGTCTTGTGGTAAAGTCACTAGAAAAAGTTGCAGTGGTGGGTCAAATTGTGAACCTTAGTGAGGTTGTTGAGAACCTTATGGAGGATATAATGTATAAGATGATACTGGGTCATAATATGAATGAGCAATTTGACTTAATGGGATCGGTTCATGAAGCAGTGAAAATGATTGGAGCTTTCAATCTGGCAGATTATGTGCCTTGGCTAGTCGTGTTTGATCTTCAGGGATTAAAACGAGGCTGCAAGAAAACCATTAAAGCACTTGATGAGGTGATGGAAAAGATAATAACAGAGCATGAACAAGCTGCTAATTTTGGCACAAGGAATCATAAAGACTTTGTAGACATTCAACTCTCAAAGATGCACCAAACCATTGATTCCCAAAGTTAA 816 0.3983 MSYATITVHAFLLLTFIYFIYTIFLSPKQRNVARKKPPGTFPHRTLHSLFKKYGPIMSLKLGQVPTIVVSSSEATELFIKTHDTSFASRPRIQSSEHLFYGSKGMEFSEYGPYWRSMRKLCTLQLLSTSKVELFAPIRREKLRLVVKSLEKVAVVGQIVNLSEVVENLMEDIMYKMILGHNMNEQFDLMGSVHEAVKMIGAFNLADYVPWLVVFDLQGLKRGCKKTIKALDEVMEKIITEHEQAANFGTRNHKDFVDIQLSKMHQTIDSQS. 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca1g04250 271 PANTHER CYTOCHROME P450 93A3-LIKE 39 266 - -
Seca1g04250 271 SUPERFAMILY Cytochrome P450 38 265 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca1g04250 271 Gene3D Cytochrome P450 32 271 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca1g04250 271 Pfam Cytochrome P450 40 265 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca1g04250 Seca-Chr1 132256844 132258009 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca1g04250 39 260 Cytochrome P450 AT3G48310 37.668 6.15e-48 164
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca1g04250 - - psat:127113357 345.51