Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca1g04247 ATGGACATTAGGTCAAACATAAAATATGGTTGCCCTAGGAACATAGAACAAGAAGATATTGAACAGGCAGCAAAACAGGCCTATGCCCATGACTTTATTTCTTCACTTCCTAATGGCTATGAAACCCTTGTTGATGATAATGTACTTAGTGGGGGACAAAACCAGCGAATTGCCATAGCCAGGGCCATTCTTAGGGACCCAGTTATTATGATACTTGATGAAGCTACCAGTGCCCTATATTCTGAGAGTGAGCATTATATCAAGAAGGTGTTGTATGCGTTGAAAGATGAATCTAAACCACAAACCATCATTATCATAGCACATAGGCTTTCTACTATTAAAGCTTCTGACAGGATCTTTGTTATGGATGATGGTGGCATGATTGAGGTGATTTTCAGTTGA 402 0.3955 MDIRSNIKYGCPRNIEQEDIEQAAKQAYAHDFISSLPNGYETLVDDNVLSGGQNQRIAIARAILRDPVIMILDEATSALYSESEHYIKKVLYALKDESKPQTIIIIAHRLSTIKASDRIFVMDDGGMIEVIFS. 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca1g04247 133 Pfam ABC transporter 24 77 IPR003439 GO:0005524
Seca1g04247 133 Gene3D - 3 129 IPR027417 -
Seca1g04247 133 PANTHER ABC TRANSPORTER B FAMILY 1 129 IPR039421 -
Seca1g04247 133 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 3 129 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca1g04247 Seca-Chr1 132202756 132203321 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca1g04247 3 130 Calmodulin-binding Proteins AT2G36910 49.231 1.74e-29 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca1g04247 - - vum:124820309 220.705