Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca1g04237 ATGTTGGGTACCTTTCCACATCGCACACTTCATTCCCTATCCAAAAAATATGGCTTTATCATGTCCTTAAAGCTGGGACAAGTCCCAACTATTGTGGTTTCCTCCTCAGAGGCTACCGAGTTATTCATCAAGACCCACGACACCATTTTTGTAAGCCGACCAAGGATTCAATCAAGTGAGCTCTTGTTCTATAGCTCCAAGGGTATGGCATTTTCTGAGTATGGTCCATACTGGCACAATATGAGGAAACTATGTACTTTTCAACTTCCTAGCACTTTGAAAGTTGAGCTTTTTGCTCCTATTAGGAGGGAGAAGCTACGTCTTGTGGTAAAGTCACTAGAAAAAGCTGCAGTGGTGGGTCAAATTGTGAATCTTAGTGAGGTTGTTGAAAACCTTATGGAGGATATATTGTATAAGATGATACTGGGTCATAATAGGAACGAGCAATTTGACTTAATGAGACTGGTTCATGAAACAGTGACAATGATTGGAGCTTTTAATCTGGCAGATTATGTGCCTTGGCTAGCCGTATTTGATCTTCAGGGATTAAAACGAGGTTGCAAGAAAACCATTAAAGCACTTGATAAGGTGTTGGAAAAGATAATAATAGAACATGAACAAGCTGCTAATTTAAGCACAAGGAATCATAAAGACTTTGTAGACATTCTACTCTCAATGATGCACCAAACCATTGATTCCCAGAGTGAACAAAATCACATCATTGATCGAACTAGCGTCAAAGCTGTTTTGCTAGATATGATTTTGGGGGCAACTGAAACATCTGCTACTGCGACTGAGTGGGCATTATCAGAACTTTTGAGGCATCCAAGGGTAATGAAAATCCTTCAAGATGAGATTGAGAATGAAATAGGAATTACGAGAATGGTGGAAGAGGAGGATTTGATGAAATTAACAGCCTTAATCCCTCGAGAATCTAGAGAAAATATCATAATTGATGGTTATTATATAAAGAAAAAATCACGAGTCATAATAAATGCATGGGCGATAGGGAGGGATCCTAATGTGTGGTCGGATAATGCTGAAACATTTCTTCCAGAGAGATTTATGGAGAAGAAAATAAATTATCAAGGACAAGACTTTCGATCTATACCATTTGGTTCTGGTCGTAGAGCTTGCCCTAGGATTTAG 1149 0.3899 MLGTFPHRTLHSLSKKYGFIMSLKLGQVPTIVVSSSEATELFIKTHDTIFVSRPRIQSSELLFYSSKGMAFSEYGPYWHNMRKLCTFQLPSTLKVELFAPIRREKLRLVVKSLEKAAVVGQIVNLSEVVENLMEDILYKMILGHNRNEQFDLMRLVHETVTMIGAFNLADYVPWLAVFDLQGLKRGCKKTIKALDKVLEKIIIEHEQAANLSTRNHKDFVDILLSMMHQTIDSQSEQNHIIDRTSVKAVLLDMILGATETSATATEWALSELLRHPRVMKILQDEIENEIGITRMVEEEDLMKLTALIPRESRENIIIDGYYIKKKSRVIINAWAIGRDPNVWSDNAETFLPERFMEKKINYQGQDFRSIPFGSGRRACPRI. 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca1g04237 382 SUPERFAMILY Cytochrome P450 3 380 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca1g04237 382 Pfam Cytochrome P450 307 380 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca1g04237 382 Pfam Cytochrome P450 6 305 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca1g04237 382 Gene3D Cytochrome P450 2 381 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca1g04237 382 PANTHER CYTOCHROME P450 93A3-LIKE 1 381 - -
Seca1g04237 382 PRINTS E-class P450 group I signature 245 262 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca1g04237 382 PRINTS E-class P450 group I signature 265 291 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca1g04237 382 PRINTS E-class P450 group I signature 14 33 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca1g04237 382 PRINTS E-class P450 group I signature 369 379 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca1g04237 Seca-Chr1 132041319 132042870 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca1g04237 2 382 Cytochrome P450 AT3G48310 36.090 2.55e-89 276
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca1g04237 - - psat:127113357 531.561