Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca1g04235 ATGGGGGATTCAATGGTTTCATCAAGAAATGTCAGTAATGAAGGTCCTGGTGTACAGGAATCAAATACTCTTCCATTTGATAACAAAGAGACTGGTGATACTGGTGAAGCCACAATTCCCTCAAATGAAAATGTAGATGATAATGCTCATGAAAATTTTAGTGATGATGAAGATGTGGACATTTACAAGATTGAAGATGAAATGGATGTGAAGAAAATTGAGTTTGTTAGTTTATCTGAAATCGAGTTGAAGAAGTATCATTTCAGTACTCGGAAGGTAGCATTTCAATTTTACAATGCTTTTGCTGAAAAGTGGGGTTTTGCAGCTAGAAAGTGGAACACTGTAAAAAACAAGAGAGGTGAGGTCACACAACAGACATTTGTTTGTTTCAAGGAAGGTTATAGGTTGAAGAAGCATTTGAAAAGGGCTAACCGGAAGAGGGAACCTAGAGCGATGACAAGATGTGGTTGTGATGCATTTTTTCGGGTAAGATTTGTAGGAGACACCGGTCGGTGGCATGTGAAAGCACTTTCTAATGATCACAGTCATGACTTGTTAGCTCAAAAATTTGTTGGGATGTTGTCCGCACATAGGAAGATGGATGAAGGTGACCTAATCCAGATGAATAGCATGAGAGATGCCGGTATTGGTGTTACACAAATTTATGGGTTAGCTGCTAATCAATCAGGCGGATATGAAAGGCTGGCATTTAGAAAGCGGGACATGTATAATGAAATTGAAAGACAGAGGCGCATGCAATATAGTGATGTGAGAGCTGCATTTGCTTATTTGAGAGAATTGCGAGCAACTGATGCTGACATGTTTTGGAGACACACTGTTGATACTCAAGGTAGACTTGAACACCTATTTTGGTGTGATGGAAGGAGCCAAGCGGATTATAGTGTGTTTGGTGATGTAGTTGCCTTTGATGCAACGTATCGGCGCAATAAGTACATGTCTCCTTTGGTTGTGTTTGCTGGAGTGAACCATCACAACCAAACAATTGTGTTTGGTAGTGCTTTAATTGCAAATGAAACGGAGGAAACTTATGTCTGGTTACTTAAGCAATTGAAAGAAGCAATGAAAGGAAAGATACCAAGCTCGGTAATTACTGATGGAGACCTTGCAATGAGAAATGCTATAAGATTTGAGTTCCCAACTTCCCATCATAGGTTATGTGCTTGGCATCTATTGAGGAATGCAACAAGCAACATTAGTAATCCGCGATTCACCTGTAAGTTCCGACGATGTATGCTCGGTGACTATGATGTGGGGAGGTTTCGCTCAAAATGGGAGAATTAG 1302 0.4017 MGDSMVSSRNVSNEGPGVQESNTLPFDNKETGDTGEATIPSNENVDDNAHENFSDDEDVDIYKIEDEMDVKKIEFVSLSEIELKKYHFSTRKVAFQFYNAFAEKWGFAARKWNTVKNKRGEVTQQTFVCFKEGYRLKKHLKRANRKREPRAMTRCGCDAFFRVRFVGDTGRWHVKALSNDHSHDLLAQKFVGMLSAHRKMDEGDLIQMNSMRDAGIGVTQIYGLAANQSGGYERLAFRKRDMYNEIERQRRMQYSDVRAAFAYLRELRATDADMFWRHTVDTQGRLEHLFWCDGRSQADYSVFGDVVAFDATYRRNKYMSPLVVFAGVNHHNQTIVFGSALIANETEETYVWLLKQLKEAMKGKIPSSVITDGDLAMRNAIRFEFPTSHHRLCAWHLLRNATSNISNPRFTCKFRRCMLGDYDVGRFRSKWEN. 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca1g04235 433 MobiDBLite consensus disorder prediction 1 53 - -
Seca1g04235 433 Pfam MULE transposase domain 306 400 IPR018289 -
Seca1g04235 433 PANTHER OS01G0519700 PROTEIN 87 432 - -
Seca1g04235 433 MobiDBLite consensus disorder prediction 1 47 - -
Seca1g04235 433 Pfam FAR1 DNA-binding domain 96 186 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca1g04235 Seca-Chr1 132028265 132030184 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca1g04235 MULE 1.6e-28 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca1g04235 - - adu:110280242 449.514