Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca1g04210 ATGGTTGGGTACACCGAAATAATAGTAGCAACAGCTTTATGCATTCTTTTTCTTTACCAATGGAGACATCACAGAATTTGGCTCATTCTTGGAATGTTACCCCAAATTCTGCTTAACTTGTCTCATTTGCATGACTATATAGCACATATATTGAAGAAGGTTGGAGGAACAAATGAATCAGAGACATGGAAATCCAGCAGGGCATTGCTCCATTCATTGTTTAAACAGAGGAATTTTGATGTGTATCTTGAGAAAACCATTCAGAGGAAGCTACAGAGTAGCTTAATTCCAATGTTGTTTCTTGAGAAAACCAATCTCTTTTTAGCAGGAAGAGACACCATAACGTCTGCTCTCACATGGTTCTTCTGGCTTGTGACAACACACCCTTTAGTGAAATCCAAGATTCTTCAAGAAATCAAAGACAATTTTGCACCTGAAAAAGGGAACCAACTTATTCTAGGTGTGGAAGAGGTGAGAAAGCTGATTTATCTTCATCCAGCTATATGTGAATCTTTGAGGCTTTTTCCTCCTATACCCTTTGAGAGAAAGCAAGCAATAACATCAGATGTTCTTCCTAGTGGCCACAGTGTTAAGCCAAATACAATGATATTGTTCTCTTTGTATGCTATGGGGAGACTTGAAGAAATATGGGGAAGTGATTGCTTGGAGTACAAGCTAGAGAGATGGATTTCAGAGAGAGGAGGCATTGTTTATGTGCCATCTTACAAATATTTAAGCTTTAATGCAGGACCAAGGACATGTTTGGCAAAGGACATGAGCTTCATTCAATTGAAGATGGTGGCAGCTGCTATTTTGTGGAATTATCAAGTGCAAGTGGTTAAAGATCATCATGTTTCCCCAAACCTTCCAATTGTTCTTTTAATGAAGCATGATCAAAACCCATTTCTAAAAAAAGAGATCATGGTTGGGTACACCGAAATAATAGTAGCAGCAGTATTATGCATCCTTTTTCTTTACCAATGGAGACATCACAGAATTTGGCCCATTCTTGGAATGTTACCCCAAATTCTGCTTAACTTGTCTCATTTGCATGACTATATAACACATATATTAAAGAAGGTTGGAGGAACAAGTGAGTTCAAAGGACCCTATTTCACCAACATGAACTTCATTCTCACATGTGACCCCTTGAATGCACACCACATTCTCAGCAAAAACTTCAGCAACTACCACAAGGGGCCTAATTTCCGTGAGATTTTTGAAGCTTTTGGTGATGGAATCTTTACAGCTGATTCAGAGACATGGAAATGCAGCAGGGCATTGCTCCATTCATTGTTTAAACAGAGGAATTTTGATGTGTTTCTTGAGAATACCATTCATAGGAAGCTACAGAGTAGCTTAATTCCAATGTTGGATCATGTAGTTCAACATGGTACCATAGTGGATCTTCAAGATGTGTTCAACAGGTTCACATTTGATAACATTTGTTCCATAGTTCTTGGATCAGATCCTAATTGCCTTTCCATTGATTTCCCTGAAGTTGCTTGTGAAAAGGCCTTTAATGAAGCAGAAGAGTCCATATTCTACAGACACATTGTGCCAACATGTGTTTGGAAGTTGCAAAGGTTGCTTCAAATTGGTCAAGAGAAAAGAATGACACAAGCATGCAGAACATTTGACCAATTCTTAGATTCATGCATAGCGTCTAAGCGTGAAGAGTTAATCAAGTGCAACAGAACCAAAATGGACAAAGAAGAAGATCATGGTGATTATGATGATTTGTTAACATGTATAATGAGAGAACAAGTACATGATGACAAGTATCTAAGGGATGTTGCATTCAATCTCTTTGTAGCAGGAAGAGACACCATAACGTCTGCTCTCACATGGTTCTTCTGGCTTGTGACAACACACCCTTTAGTGAAATCCAAGATTCTTCAAGAAATCAAAGACAATTTTGCACCTGAAAAAGGGAACCAACTTATTCTAGGTGCGGAAGAGGTGAGAAAGCTGATTTATCTTCATGCAGCTATATGTGAATCTTTGAGGCTTTTTCCTCCTATACCCTTTGAGAGAAAGCAAGCAATAACATCAGATGTTCTTCCTAGTGGCCACAGTGTTAAGCCAAATACAATGATATTGTTCTCTTTGTATGCTATGGGGAGACTTGAAGAAATATGGGGAAGTGATTGCTTGGAGTACAAGCTAGAGAGATGGATTTCAGAGAGAGGAGGCATTGTTTATGTGCCATCTTACAAATATTTAAGCATTAATGCAGGACCAAGGACATGTTTGGCAAAGGACATGAGCTTCATTCAATTGAAGATGGTGGCAGCTGCTATTTTGTGGAATTATCAAGTGCAAGTGGTTAAAGATCATCCTGTTTCCCCAAACCTTTCAATTGTTCTTTTAATGAAGCATGGTCTAAAGGTTAGGATCACTGAAAATGCGTTGTGA 2418 0.3859 MVGYTEIIVATALCILFLYQWRHHRIWLILGMLPQILLNLSHLHDYIAHILKKVGGTNESETWKSSRALLHSLFKQRNFDVYLEKTIQRKLQSSLIPMLFLEKTNLFLAGRDTITSALTWFFWLVTTHPLVKSKILQEIKDNFAPEKGNQLILGVEEVRKLIYLHPAICESLRLFPPIPFERKQAITSDVLPSGHSVKPNTMILFSLYAMGRLEEIWGSDCLEYKLERWISERGGIVYVPSYKYLSFNAGPRTCLAKDMSFIQLKMVAAAILWNYQVQVVKDHHVSPNLPIVLLMKHDQNPFLKKEIMVGYTEIIVAAVLCILFLYQWRHHRIWPILGMLPQILLNLSHLHDYITHILKKVGGTSEFKGPYFTNMNFILTCDPLNAHHILSKNFSNYHKGPNFREIFEAFGDGIFTADSETWKCSRALLHSLFKQRNFDVFLENTIHRKLQSSLIPMLDHVVQHGTIVDLQDVFNRFTFDNICSIVLGSDPNCLSIDFPEVACEKAFNEAEESIFYRHIVPTCVWKLQRLLQIGQEKRMTQACRTFDQFLDSCIASKREELIKCNRTKMDKEEDHGDYDDLLTCIMREQVHDDKYLRDVAFNLFVAGRDTITSALTWFFWLVTTHPLVKSKILQEIKDNFAPEKGNQLILGAEEVRKLIYLHAAICESLRLFPPIPFERKQAITSDVLPSGHSVKPNTMILFSLYAMGRLEEIWGSDCLEYKLERWISERGGIVYVPSYKYLSINAGPRTCLAKDMSFIQLKMVAAAILWNYQVQVVKDHPVSPNLSIVLLMKHGLKVRITENAL. 806
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca1g04210 805 CDD CYP86A 366 796 - -
Seca1g04210 805 PRINTS P450 superfamily signature 245 254 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca1g04210 805 PRINTS P450 superfamily signature 166 177 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca1g04210 805 PRINTS P450 superfamily signature 109 126 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca1g04210 805 PRINTS E-class P450 group I signature 98 115 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca1g04210 805 PRINTS E-class P450 group I signature 118 144 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca1g04210 805 PRINTS E-class P450 group I signature 254 277 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca1g04210 805 PRINTS E-class P450 group I signature 244 254 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca1g04210 805 SUPERFAMILY Cytochrome P450 12 295 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca1g04210 805 PANTHER CYTOCHROME P450 323 798 - -
Seca1g04210 805 Gene3D Cytochrome P450 327 804 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca1g04210 805 SUPERFAMILY Cytochrome P450 332 801 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca1g04210 805 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 247 256 IPR017972 GO:0005506|GO:0016705
Seca1g04210 805 Gene3D Cytochrome P450 99 301 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca1g04210 805 Pfam Cytochrome P450 41 291 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca1g04210 805 Pfam Cytochrome P450 333 793 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca1g04210 Seca-Chr1 130999940 131004787 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca1g04210 324 804 Cytochrome P450 AT2G23180 45.272 2.54e-160 474
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca1g04210 - - gmx:100792360 676.011