Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca1g04209 ATGTTGGAACATGTAGTTCAACATGGAACCATAGTGGATCTTCAAGATGTGTTCAACAGGTTCACATTTGATAACATCTGTTCCATAGTTCTTGGATCATATTCTAATTGCCTTTCCATTCATTTCCCTGAAATTGCTTGTGAAAAGGCCTTTAATGAAGCAGAAGAGTGCATATTCTACAGACACATTGTGCCAACATGTGTTTGGAAGTTGCAAAGGTTGCTTCAAATTGGTCAAGAGAAAAAAATGACACAAGCATGCAGAACATTTGACCAATTCTTAGATTCATGCATAGCATCTAAGCGTGAAGAGTTATTCAAGTGCAACAGAACCAAAATAGACAAAGAAGCAGATCATGGTGATGATGATGATTTGTTAACATGTATAATGAGAGAACAAGTACATGATGACAAGTATCTAAGGGATACTGCATTCAATCTCTTTGTAGCTGGAAGAGACACCATAACTTCTGCTCTCACATGGCTTTTTCCTCCTATACCCTTTGAGAGAAAGCAAGCAATAACATCAGATGTTCTTCCTAGTGGCCACAATGTTAAGCCAAATACAATGATATTGTTCTCTTTGTATGCTATACGGAGACATGAAGAAATATGGGGAAGTGATTGCTTGGAGTACAAGCCAGAGAGATGGACTTCAGAGAGAGGAGGCATTGTTTATGTGCCATCTTACAAATATTTAAGCTTTAATGCAGGACCAAGGACATGTTTGGGAAAGGACATGAGCTTCATTCAATTGAAGATGGTGGCAGCTGCTATTTTGTGGAATTATCAAGTGCAAGTGGTTAAAGATCATCCTGTTTCCCCGAACCTTTCAATTGTTCTTTTAATGAAGCATGCGGATTCAGAGACATGGAAATCCAGCATGGCATTACTCCATTCATTGTTTAAACAGAGGAATTTTGATGTGTTTCTTGAGAAAACCATTAACAGGAAGCTACGGAGTAGCTTAATTCCAATGTTGGAACATGTAGTTCAACATGGAACCATAGTGGATCTTCAAGATGTGTTCAACAGGTTCACATTTGATAACATCTGTTCCATAGTTCTTGGATCATATTCTAATTGCCTTTCCATTCATTTCCCTGAAATTGCTTGTGAAAAGGCCTTTAATGAAGCAGAAGAGTCCATATTCTACATACACATTGTGCCAACATGTGTTTGGAAGTTGCAAAGGTTGCTTCAAATTGGTCAAGAGAAAAAAATGACACAAGCATGCAGAACATTTGACCAATTTTTAGATTCATGCATAGCATCTAAGCGTGAAGAGTTAATCAAGTGCAACAGAACCAAAATAGACAAAGAAGCAGATCATGGTGATGATGATGATTTGTTAACATGTGTGGAAGAGGTGAGAAATCTGATTTATCTTCATGCAGCTATATGTGAATCTTTGAGGCTTTTTCCTCCTATACCCTTTGAGAGAAAGCAAGCAATAACATCAGATGTTCTTCCTAGTGGCCACAGTGTTAAGCCAAATACAATGATATTGTTCGCTTTGTATGCTATACGGAGACATGAAGAAATATGGGGAAGTGATTGCTTGGAGTACAAGCCAGAGAGATGGACATCAGAGAGAGGAGGCATTGTTTATGTGCCATCTTACAAATATTTAAGCTTTAATGCAGGACCAAGGACATGTTTGGCAAACGACATGAGCTTCATTCAATTGAAGATGGTGGCAGCTGCTATTTTGTGGAATTATCAAGTGCAAGTGGTTAAAGATCATCCTGTTTCCCCAAACCTTTCAATTGTTCTTTTAATGAAGCATGGTCTAAAGTTTAGGATCACTGAAAATGCGTTGTGA 1824 0.381 MLEHVVQHGTIVDLQDVFNRFTFDNICSIVLGSYSNCLSIHFPEIACEKAFNEAEECIFYRHIVPTCVWKLQRLLQIGQEKKMTQACRTFDQFLDSCIASKREELFKCNRTKIDKEADHGDDDDLLTCIMREQVHDDKYLRDTAFNLFVAGRDTITSALTWLFPPIPFERKQAITSDVLPSGHNVKPNTMILFSLYAIRRHEEIWGSDCLEYKPERWTSERGGIVYVPSYKYLSFNAGPRTCLGKDMSFIQLKMVAAAILWNYQVQVVKDHPVSPNLSIVLLMKHADSETWKSSMALLHSLFKQRNFDVFLEKTINRKLRSSLIPMLEHVVQHGTIVDLQDVFNRFTFDNICSIVLGSYSNCLSIHFPEIACEKAFNEAEESIFYIHIVPTCVWKLQRLLQIGQEKKMTQACRTFDQFLDSCIASKREELIKCNRTKIDKEADHGDDDDLLTCVEEVRNLIYLHAAICESLRLFPPIPFERKQAITSDVLPSGHSVKPNTMILFALYAIRRHEEIWGSDCLEYKPERWTSERGGIVYVPSYKYLSFNAGPRTCLANDMSFIQLKMVAAAILWNYQVQVVKDHPVSPNLSIVLLMKHGLKFRITENAL. 608
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca1g04209 607 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 546 555 IPR017972 GO:0005506|GO:0016705
Seca1g04209 607 Gene3D Cytochrome P450 451 606 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca1g04209 607 PANTHER CYTOCHROME P450 437 598 - -
Seca1g04209 607 SUPERFAMILY Cytochrome P450 286 603 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca1g04209 607 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 235 244 IPR017972 GO:0005506|GO:0016705
Seca1g04209 607 Gene3D Cytochrome P450 1 162 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca1g04209 607 Gene3D Cytochrome P450 287 450 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca1g04209 607 SUPERFAMILY Cytochrome P450 8 283 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca1g04209 607 PRINTS E-class P450 group I signature 464 482 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca1g04209 607 PRINTS E-class P450 group I signature 543 553 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca1g04209 607 PRINTS E-class P450 group I signature 553 576 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca1g04209 607 PRINTS E-class P450 group I signature 139 156 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca1g04209 607 Gene3D Cytochrome P450 163 286 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca1g04209 607 Pfam Cytochrome P450 162 278 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca1g04209 607 Pfam Cytochrome P450 286 433 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca1g04209 607 Pfam Cytochrome P450 10 163 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca1g04209 607 Pfam Cytochrome P450 451 594 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca1g04209 Seca-Chr1 130986819 130993489 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca1g04209 423 606 Cytochrome P450 AT2G23180 45.109 1.67e-52 186
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca1g04209 - - gmx:100792360 391.734