Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca1g04205 ATGTTGCATCATGTAGTTCAACATGGTACCATAGTGGATCTTCAAGATGTGTTCAACAAGTTCACATTTGATAACATCTGTTCCATAGTTCTTGGATCAGATCCTAATTGTCTTTCCATTGATTTCCCTGAAGTTGCTTGTGAAAAGGCCTTTAATGAAGCAGAAGAGTCCATATTCTACAAACACATTGTGCCAACAAGCGTTTGGAAGTTTCAAAGGTTGCTTCAAATTCGTCAAGAGAAAAAAATGACACAAGCATGCAGAACATTTGACCAATTCTTAGATTCATGCATAGCATCTAAGCGTGAAGAGTTAATCAAGTGCAACAGAACAAAAATGGACAAAGAAGCAGATCATGGTGATGATGATGATTTGTTAACATGTATAATGAGAGAACAAGTACATGATGACAAGTATCTAAGGGATGCTGCATTCAATCTCTTTGTAGCAGGAAGAGACACCATAACGTCTGCTCTCACATGGTTCTTCTGGCTTGTGACAACACACCCTTTAGTGAAATCCAAGATTCTTCAAGAAATCAAAGACAATTTTGCACCTGGAAAAGGGAACGAACTTATTCTAGGTGTGGAAGAGGTGAGAAAGCTGATTTATCTTCATGCAGCTATATGTGAATCTTTGAGGCCTTTTCCTCCTATACCCTTTGAGAGAAAGCAAGCAATATCATCTGAGGTTCTTCCTAGTTTCCACAGTGTTAAGCCAAATACAATGATATTGTTCTCTTTGTATGCTATGGGGAGACTTGAAGAAATATGGGGAAGTGATTGCTTGGAGTACAATCCAGAGAGATGGATTTTAGAGAGAGGAGGCATTGTTTATGTGCCATCTTACGAATATTTAAGCTTTAATGTAGGACCAAGGACATGTTTGCGAAAGGACATGAGCTTCATTCAATTGAAGATGGTGGCAGCTGCTATTTTGTGGAATTATCAAGTGCAAGTGGTTAAAGATCATCCTGTTTCCCCAAACCTTTCAATTGTTCTTTTAATGAAGCATGGTCTAAAGGTTAGGATCACTGAAAATGCGTTGTGA 1050 0.3838 MLHHVVQHGTIVDLQDVFNKFTFDNICSIVLGSDPNCLSIDFPEVACEKAFNEAEESIFYKHIVPTSVWKFQRLLQIRQEKKMTQACRTFDQFLDSCIASKREELIKCNRTKMDKEADHGDDDDLLTCIMREQVHDDKYLRDAAFNLFVAGRDTITSALTWFFWLVTTHPLVKSKILQEIKDNFAPGKGNELILGVEEVRKLIYLHAAICESLRPFPPIPFERKQAISSEVLPSFHSVKPNTMILFSLYAMGRLEEIWGSDCLEYNPERWILERGGIVYVPSYEYLSFNVGPRTCLRKDMSFIQLKMVAAAILWNYQVQVVKDHPVSPNLSIVLLMKHGLKVRITENAL. 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca1g04205 349 PRINTS E-class P450 group I signature 285 295 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca1g04205 349 PRINTS E-class P450 group I signature 159 185 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca1g04205 349 PRINTS E-class P450 group I signature 295 318 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca1g04205 349 PRINTS E-class P450 group I signature 139 156 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca1g04205 349 Gene3D Cytochrome P450 1 348 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca1g04205 349 PANTHER CYTOCHROME P450 5 342 - -
Seca1g04205 349 PRINTS P450 superfamily signature 207 218 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca1g04205 349 PRINTS P450 superfamily signature 150 167 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca1g04205 349 PRINTS P450 superfamily signature 286 295 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca1g04205 349 SUPERFAMILY Cytochrome P450 8 345 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca1g04205 349 Pfam Cytochrome P450 9 337 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca1g04205 Seca-Chr1 130964704 130965753 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca1g04205 1 348 Cytochrome P450 AT2G23180 43.611 3.77e-110 329
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca1g04205 - - gmx:100780625 483.796