Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca1g04204 ATGTTACCCCAAATTTTTCTTAACTTGTCTCATTTGCATGACTATATAGCACATATATTGAAGAAGGTTGGAGGAACAAGTGAGTTCAAAGGACCCTGTTTCACCAACATGAACTTCATTCTCACATGTGACCCCTTGAATCCACACCACATTCTCAGCAAAAACATCAACAACTACCACAAGGGGCCTAATTTCCGTGAGATTTTTGAAGCTTTTGGTGATGGAATCTTCACTGCTGATTCAGAGACATGGAAATCCAGCAAGGCATTGCTCCATTCATTGTTTAAACAGAGGAAGTTTGATGTGTTTCTTGAGAAAACCATTCAGAGGAAGCTACAGAGTAGCTTAATTCCAATGTTGGTTCATGTAGTTCAACATGGTACCATAGTGGATCTTCAAGATGTGTTCAACAGGTTCACATTTGATAACATTTGTTCCATAGTTCTTGGATCAGATCCTAATTGCCTTTCCATTGATTTCCCTGACGTTGCTTGTGAAAAGGCCTTTAATGAAGCAGAAGAGTCCATATTCTACAGACACATTGTTCCAACATGTGTTTGGAAGTTGCAAAAGTTGCTTCAAATTGGTCAAGAGAAAAAAATGACACAAGCATGCAGAACATTTGACCAATTCTTAGATTCATGCATAACATCTAAGCGTGAAGAGTTAATCAAGTGCAACAGAACCAAAACGGACAAAGAAGCAGATCATGGTGATGATGATGATTTGTTAACATGTATAATGAGAGAACAAGTACATGATGACAAGTATCTAGGGGATGCTGCATTCAATCTCTTTGTAGCAGGAAGAGACACCATAACGTCTGCTCTCACATGGTTCTTCTGGCTTGTGACAACACACCCTTTAGTGAAATCCAAGATTCTTCAAGAAATCAAAGACAATTTTGCACCTGAAAAAGAGAACCAACTTATTCTAGGTGTGGAATATGTGAGAAAGCTGATTTATCTTCATGCAGCTATATGTGAATCTTTGAGGCTTTTTCCTCCTATACCCTTTGAGAGAAAGCAAGCAATAACATCAGATGTTCTTCCTAGTGGCCACAGTGTTAAGCCAAATACAAATATATTGTTCTCTATGTATGCTATGGGGAGACTTGAAGAAATATGGGGAAGTGATTGCTTGGAGTACAAGGCAGAGAGATGGATTTCAGAGAGAGGAGGCATTGTTTATGTGCCATCTTACAAATATTTAAGCTTTAATGCAAGACCAAGGACATGTTTGGGAAAGGACGTGAGCTTCATTTAA 1266 0.3863 MLPQIFLNLSHLHDYIAHILKKVGGTSEFKGPCFTNMNFILTCDPLNPHHILSKNINNYHKGPNFREIFEAFGDGIFTADSETWKSSKALLHSLFKQRKFDVFLEKTIQRKLQSSLIPMLVHVVQHGTIVDLQDVFNRFTFDNICSIVLGSDPNCLSIDFPDVACEKAFNEAEESIFYRHIVPTCVWKLQKLLQIGQEKKMTQACRTFDQFLDSCITSKREELIKCNRTKTDKEADHGDDDDLLTCIMREQVHDDKYLGDAAFNLFVAGRDTITSALTWFFWLVTTHPLVKSKILQEIKDNFAPEKENQLILGVEYVRKLIYLHAAICESLRLFPPIPFERKQAITSDVLPSGHSVKPNTNILFSMYAMGRLEEIWGSDCLEYKAERWISERGGIVYVPSYKYLSFNARPRTCLGKDVSFI. 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca1g04204 421 CDD CYP86A 28 421 - -
Seca1g04204 421 PRINTS P450 superfamily signature 268 285 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca1g04204 421 PRINTS P450 superfamily signature 404 413 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca1g04204 421 PRINTS P450 superfamily signature 325 336 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca1g04204 421 PRINTS P450 superfamily signature 413 421 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca1g04204 421 PANTHER CYTOCHROME P450 2 420 - -
Seca1g04204 421 SUPERFAMILY Cytochrome P450 2 418 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca1g04204 421 Gene3D Cytochrome P450 2 420 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca1g04204 421 PRINTS E-class P450 group I signature 277 303 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca1g04204 421 PRINTS E-class P450 group I signature 413 421 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca1g04204 421 PRINTS E-class P450 group I signature 403 413 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca1g04204 421 PRINTS E-class P450 group I signature 257 274 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca1g04204 421 Pfam Cytochrome P450 39 417 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca1g04204 Seca-Chr1 130950351 130951616 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca1g04204 1 419 Cytochrome P450 AT2G23180 43.619 1.13e-136 400
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca1g04204 - - aprc:113867564 591.267