Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca1g04203 ATGTTACCTCAAATTCTGCTTAACTTGTCTCATTTGCATGACTATATAGCACATATATTGAAGAAGGTTGGAGGAACGAGTGAGTTCAAAGGACCATGTTTCACCAACATGAACTTCATTCTCACATATGACCCCTTGAATGTACACCACATTCTCAGCAAAAACTTCATCAACTACCACAAGGGGCCTAATTTCCGTGAGATTTTTTATGCTTTTGGTGATGGAATCTTCACTACTGATTCAGAGACATGGAAATCCAGCAGGGCATTGCTCCATTCATTGTTTAAACAGAGGAATTTGGATTTGTTTCTTGAGAAAACCATTCATAGAAAGCTACAGAGTAGCTTACTTCCAATGTTGGATCACGTAGTTCAACAAGGTACCATAGTCGATCTTCAAGATGTGTTTAACAGGTTCACATTTGATAACATATGTTCCATAGTTCTTGGATCAGATCCTAATTGCCTTTCCATTGATTTCCCTGAAGTTGCTTGTGAAAAGGCCTTTAATGAAGCAAAAAAGTCCATATTCTATAGACACATTGTGCCAACATGTGTTTGGAAGTTGCAAAGGTTGCTTCAAATTGGTCAAGAGAAAAAAATGACACAAGCATGCAGAACATTTGACCAATTCATAGATTCATGCATAGCATCTAAGCGTGAAGAGTTAATCAAGTGCAACAGAACAAAAATGGACAAAGAAGCAGATCATGGTGATGATGATGATTTGTTAACATGTATAATGAGAGAACAAGTACATGATGACAAGTTTTTAAGGGATGTTGCATTCAATCTCTTTGTAGCAGGAAGAGACACCATAACGTCTGCTCTCACATGGTTCTTCTGGCTTGTTACAACACACCCTTTAGTGAAATCCAAGATTATTCAAGAAATCAAAGACAATTTGGCACCTGAAAAAGGGAACCAACTTATTCTAGGTATGGAAGAGGTGAGGAAGCTGATTTATCTTCATGCAGCTATATGTGAATCTTTAAGGCTTTTTCCTCCTATACCCTTTGAGAGAAAGCAAGCAATAACATCAGATGTTCTTCCTAGTGGCCACAGTGTTAAGCCAAATACAATGATATTGTTCTCTTTGTATGCTACAGGGAGACTTGAAGAAATATGGGGAAGTGATTGCTTGAAGTACAAGCCAGAGAGATGGATTTCAGAGAGAGGAGGCATTGTTTATGTGCCATCTTACAAATATTTAAGCTTTAATGCAGGACCAAGGACATGTTTGGGAAACGACATGAGCTTCATTCAATTGAAGATGATGGCAACTGCTATTTTGTGGAATTATCAAGTGCAAGTGGTTAAAGATCATCCTGTTTCCCCAAACCTTTCAATTGTTCTTTTAATGAAGCATGGTCTAAAGGTTAGGATCACTGAAAATGCGTTGTGA 1404 0.3789 MLPQILLNLSHLHDYIAHILKKVGGTSEFKGPCFTNMNFILTYDPLNVHHILSKNFINYHKGPNFREIFYAFGDGIFTTDSETWKSSRALLHSLFKQRNLDLFLEKTIHRKLQSSLLPMLDHVVQQGTIVDLQDVFNRFTFDNICSIVLGSDPNCLSIDFPEVACEKAFNEAKKSIFYRHIVPTCVWKLQRLLQIGQEKKMTQACRTFDQFIDSCIASKREELIKCNRTKMDKEADHGDDDDLLTCIMREQVHDDKFLRDVAFNLFVAGRDTITSALTWFFWLVTTHPLVKSKIIQEIKDNLAPEKGNQLILGMEEVRKLIYLHAAICESLRLFPPIPFERKQAITSDVLPSGHSVKPNTMILFSLYATGRLEEIWGSDCLKYKPERWISERGGIVYVPSYKYLSFNAGPRTCLGNDMSFIQLKMMATAILWNYQVQVVKDHPVSPNLSIVLLMKHGLKVRITENAL. 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca1g04203 467 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 406 415 IPR017972 GO:0005506|GO:0016705
Seca1g04203 467 PRINTS E-class P450 group I signature 277 303 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca1g04203 467 PRINTS E-class P450 group I signature 413 436 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca1g04203 467 PRINTS E-class P450 group I signature 324 342 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca1g04203 467 PRINTS E-class P450 group I signature 257 274 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca1g04203 467 PRINTS E-class P450 group I signature 403 413 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca1g04203 467 Gene3D Cytochrome P450 2 466 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca1g04203 467 SUPERFAMILY Cytochrome P450 6 463 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca1g04203 467 PRINTS P450 superfamily signature 325 336 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca1g04203 467 PRINTS P450 superfamily signature 404 413 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca1g04203 467 PRINTS P450 superfamily signature 268 285 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca1g04203 467 PRINTS P450 superfamily signature 413 424 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca1g04203 467 Pfam Cytochrome P450 36 455 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca1g04203 467 CDD CYP86A 28 458 - -
Seca1g04203 467 PANTHER CYTOCHROME P450 2 460 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca1g04203 Seca-Chr1 130914917 130916320 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca1g04203 1 466 Cytochrome P450 AT2G23180 44.979 4.72e-160 461
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca1g04203 - - gmx:100792360 659.448