Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca1g04202 ATGGTTGGGTACACCGAAATACTAGTAGCAGCAGTTTTATGCATCCTTTTTCTTTACCAATGGAGACATCACAAAATTTGGCCCATTCTTGGAATGTTACCCCAAATTCTGCTTAACTTGTCTCATTTGCATGACTATATAGCACATAGATTGAAGGAGGTTGGAGGAACAAGTGAGTTCAAAGGACCCTGTTTTACCAACATGAACTTCATTCTCACATGTGACCCCTTGAATGCACACCACATTCTCAGCAAAAACTTCAGCAACTATATTTTTGAAGCTTTTGGTGATGGAATATTCACTGCTGATTCAGAGACATGGAAATCCAGCAGGGCATTGCTCCATTCATTGTTTAAACAGAGAAATTTTGATATGTTTCTTGAGAAAACCATTCAGAGGAAGCTACAGAGTAGCTTACTTCCAATGTTGGATTATGTAGTTCAACATGGTACCATAGTGGATCTTCAAGATGTGTTCAACAAGTTCACATTTGATAACATCTGTTCCATAGTTCTTGGATCAGATCCTAATTGCCTTTCCATTGATTTCCTTGAAGTTGCTTGTGAAAAGGCCTTTAATGAAGCAGAAGAGTCCATATTCTACAGACACATTGTGCCAACATGTGTTTGGAAGTTGCAAAGGTTGCTTCAAATTGGTCAAGAGAAAAAAATGACACAAGCATGCAGCACATTTGACCAATTCTTAGATTCATGCATAACATCTAAGCGTGAAGAGTTAATCAAGTGCAACAGAACCAAAATGGGCAAAGAAGCAGATCATGGTGATGATGATGACTTGTTAACATGTATAATGAGAGAACAAGTACATGATGACAAGTATATAAGGGATGCTGCATTCAACCTCTTTGTAGCAGGAAGAGACACCATAACCTCTGCTCTCACATGGTTCTTCTGGCTTTTGACAACACACCCTTTAGTGAAATCCAAGATTCTTCAAGAAATCAAAGACAATTTTGCACCTGAAAAAGGGAAGCAATTGATTCTAGGTGTGGAAGAGGTGAGAAAGCTGATTTATCTTCATGCAGCTATATCTGAATCTTTGAGGCTTTTTCCTCCTATACCCTTTGAGAGAAAGCAAGCAATAACATCAGATGTTCTTCCTAGTGGGCACAATGTTAAGCCAAATACAATGATATTGTTCTCTTTGTATGCTATGGGGAGACTTGAAGAAATATGGGGAAGTGATTGCTTGGAGTACAAGCCAGAGAGATGGATTTCAGAGAGAGGAGGCATTGTTTATGTGCCATCTTACAAATATTTAAGCTTTAATGCAGGACCAAGGACATGTTTGGGAAAGGACATGAGCTTCATTCAATTGAAGATGGTGGTAGCTTCTATTTTGTGGAATTATCAAGTGCAAGTGGTTGAAGATCATCCTGTTTCCCCAAGCCTTTCAATTGTTCTTTCAATGAAGCATGGACTGAAGGTTAGGATCACTGAAAATGCATTGTGA 1473 0.3876 MVGYTEILVAAVLCILFLYQWRHHKIWPILGMLPQILLNLSHLHDYIAHRLKEVGGTSEFKGPCFTNMNFILTCDPLNAHHILSKNFSNYIFEAFGDGIFTADSETWKSSRALLHSLFKQRNFDMFLEKTIQRKLQSSLLPMLDYVVQHGTIVDLQDVFNKFTFDNICSIVLGSDPNCLSIDFLEVACEKAFNEAEESIFYRHIVPTCVWKLQRLLQIGQEKKMTQACSTFDQFLDSCITSKREELIKCNRTKMGKEADHGDDDDLLTCIMREQVHDDKYIRDAAFNLFVAGRDTITSALTWFFWLLTTHPLVKSKILQEIKDNFAPEKGKQLILGVEEVRKLIYLHAAISESLRLFPPIPFERKQAITSDVLPSGHNVKPNTMILFSLYAMGRLEEIWGSDCLEYKPERWISERGGIVYVPSYKYLSFNAGPRTCLGKDMSFIQLKMVVASILWNYQVQVVEDHPVSPSLSIVLSMKHGLKVRITENAL. 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca1g04202 490 PANTHER CYTOCHROME P450 16 483 - -
Seca1g04202 490 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 429 438 IPR017972 GO:0005506|GO:0016705
Seca1g04202 490 Gene3D Cytochrome P450 18 489 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca1g04202 490 SUPERFAMILY Cytochrome P450 25 486 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca1g04202 490 CDD CYP86A 59 481 - -
Seca1g04202 490 PRINTS E-class P450 group I signature 347 365 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca1g04202 490 PRINTS E-class P450 group I signature 280 297 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca1g04202 490 PRINTS E-class P450 group I signature 300 326 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca1g04202 490 PRINTS E-class P450 group I signature 426 436 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca1g04202 490 PRINTS E-class P450 group I signature 436 459 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca1g04202 490 PRINTS P450 superfamily signature 348 359 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca1g04202 490 PRINTS P450 superfamily signature 436 447 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca1g04202 490 PRINTS P450 superfamily signature 427 436 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca1g04202 490 PRINTS P450 superfamily signature 291 308 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca1g04202 490 Pfam Cytochrome P450 27 472 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca1g04202 Seca-Chr1 130901968 130903464 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca1g04202 27 489 Cytochrome P450 AT2G23180 45.135 1.97e-160 463
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca1g04202 - - gmx:100792360 652.899