Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca1g04201 ATGGCTGTGTTTGGCATTGTTGAATTCCTTGTGGCGATTTTTCTCTTTGTTTCAATCCACTATTGGAGGATCAATAGACACACACCAATTACAAAATGGCCCTTGCTTGGAATGCTACCAGGTCTCTTTCTCAACTTGTCCTGCATCCATGATTATCTAAACTCAGTTTTGAAACATGAAGGAGGCACTTTCATTTTTGAAGGACCATGGCTAACAAACATGAACATGGTCTTCACCAGTGACCCCATGAACGTGCAACACATCACAAGCACAAAGTTTGAAAACTATGGTAAAGGGAATGACTTTAGAGAGATTTTTGAAGTTCTTGGAGATGGGATTTTCAGGTCTGATTCCCACACATGGAAGCACAACAGAACCATGCTTCATTCAATTTTCAAGCAGACCATTGAGAGAAAAGTTGATAATTGTTTGCTTCCATTTCTTGATCATGCATTCAGAGAAGGGGTTCAGGTGGATTTACAAGATGCTTTTCAGAGGTTAACATTTGACAACATCTGCTCTGTAGTTTTAGGATTTGATCCTAATTGCCTTTCCATTGAATTACCACAAGTTGCATGTGAGAAAGCCTTCAGTGAAGCTGAGGCTTGTTTGTTCTACAGACATGTCAAGCCAAGATTCTTTTGGAAGCTGCAGAGATGGCTTCATGTTGGGAAAGAGAAGCAGTTCACAGAAGACCTGAAAATTGTTGACCAAATGTTGTATGCACAAATCACATCCAAACTCAAAGTACAAAGGGAGAATGATTCACCACAGTTTGACTTGCTAAATGCCCTTATAAATGAAGTAGTGAATGGAGAAAATGAAATAGATGAGAGGTTTCTGAGAGACACAGCAATAAATCTCCTTGCTGCTGGGAGAGACACCATTAGTGCAGGGCTTACTTGGTTTTTCTGGCTGGTAGCAACACACCCATCTGTTGAAGCTAAGATTGTTGAAGAGATCAGGGAAAATTTATCAGCAACACAAGGTAATAATTGGAAGGATTTAGGTGTGGAAGGGCTTAGCAGGTTAGTTTACCTCCATGGAGCTATATGTGAAGCCTTAAGGCTTTATCCTCCAGTACCTTTTGAGCACAAGTGTGCATTACAATCTGATGTGCTTCCTAGTGGCCATAGAGTTAAGTCAAATACCATGATAGTGTACTCTCTATACTCAGTGGGAAGGGTGGAGGAAATATGGGGAGAAGATTGCTTGAAATTTAGACCAGAGAGGTGGATTTCTAAGAGAGGAGGGATTATTCATGTACCCTCTTACAAGTTCATTGCTTTCAATGCAGGACCAAGAAGTTGTTTAGGTAAGGACATAAGCTTCACTGAGATGAAGATGGTTGCTGCTGCTATATTGTGGAATTATCACATCCAAATGGTTGAAGGACACCCCATAATCCCAAGTGTTTCTGTTGTCCTTCACATGAAACATGGCTTGAAGGTTATGGTGACAAAAAGAAGCATTTGA 1476 0.4051 MAVFGIVEFLVAIFLFVSIHYWRINRHTPITKWPLLGMLPGLFLNLSCIHDYLNSVLKHEGGTFIFEGPWLTNMNMVFTSDPMNVQHITSTKFENYGKGNDFREIFEVLGDGIFRSDSHTWKHNRTMLHSIFKQTIERKVDNCLLPFLDHAFREGVQVDLQDAFQRLTFDNICSVVLGFDPNCLSIELPQVACEKAFSEAEACLFYRHVKPRFFWKLQRWLHVGKEKQFTEDLKIVDQMLYAQITSKLKVQRENDSPQFDLLNALINEVVNGENEIDERFLRDTAINLLAAGRDTISAGLTWFFWLVATHPSVEAKIVEEIRENLSATQGNNWKDLGVEGLSRLVYLHGAICEALRLYPPVPFEHKCALQSDVLPSGHRVKSNTMIVYSLYSVGRVEEIWGEDCLKFRPERWISKRGGIIHVPSYKFIAFNAGPRSCLGKDISFTEMKMVAAAILWNYHIQMVEGHPIIPSVSVVLHMKHGLKVMVTKRSI. 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca1g04201 491 PRINTS P450 superfamily signature 437 448 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca1g04201 491 PRINTS P450 superfamily signature 428 437 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca1g04201 491 PRINTS P450 superfamily signature 349 360 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca1g04201 491 PRINTS P450 superfamily signature 291 308 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca1g04201 491 SUPERFAMILY Cytochrome P450 32 489 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca1g04201 491 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 430 439 IPR017972 GO:0005506|GO:0016705
Seca1g04201 491 CDD CYP86A 64 482 - -
Seca1g04201 491 PANTHER CYTOCHROME P450 22 484 - -
Seca1g04201 491 Pfam Cytochrome P450 49 472 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca1g04201 491 Gene3D Cytochrome P450 12 491 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca1g04201 491 PRINTS E-class P450 group I signature 437 460 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca1g04201 491 PRINTS E-class P450 group I signature 300 326 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca1g04201 491 PRINTS E-class P450 group I signature 348 366 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca1g04201 491 PRINTS E-class P450 group I signature 427 437 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca1g04201 491 PRINTS E-class P450 group I signature 280 297 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca1g04201 Seca-Chr1 130870207 130871709 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca1g04201 1 491 Cytochrome P450 AT4G39490 44.894 5.46e-162 467
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca1g04201 - - gmx:100785815 753.436