Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca1g04189 ATGTGGAATCCTCTGTCTTGGGTTATGGAGGCTACTGCTATAATGGCAGTTGCACTTGCCAATGGAGGGCGGAAGCCTTCTGACTGGCAAGATTTTGTGGGTATCATCACCGATCTTATCATCAATTCAACTATTAGTTTCATTGAGGAGAACAATGTTCGTAATGCTGCAGCAGCTCTCATGGCTCGTCTTGCTCCAAAAGCAAAAAGAGGTCTTTTAGATTTAAAGCAGATAAATAGACTTCTTTTTCTTCTCATTCTCTTTACCCCTGGATTTCCCAATGCATCTGGACTTGAAACAACCCAAAAGAAAGTGAGATATGGCATATATAGACATACTTACGACCAAGAAGGACAGGCGGGAAAAGCAAGGTTAAATATAAGGGTCGAAGTTTGA 396 0.4141 MWNPLSWVMEATAIMAVALANGGRKPSDWQDFVGIITDLIINSTISFIEENNVRNAAAALMARLAPKAKRGLLDLKQINRLLFLLILFTPGFPNASGLETTQKKVRYGIYRHTYDQEGQAGKARLNIRVEV. 132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca1g04189 131 PANTHER CALCIUM-TRANSPORTING ATPASE 1 69 - -
Seca1g04189 131 SUPERFAMILY Calcium ATPase, transmembrane domain M 1 66 IPR023298 -
Seca1g04189 131 Gene3D - 1 105 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca1g04189 Seca-Chr1 130508486 130510658 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca1g04189 1 69 Primary Pumps ATPases AT2G07560 81.159 2.10e-23 92.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca1g04189 K01535 - csin:114312884 119.783