Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca1g04184 ATGGCGTTGATTACTAATGGTTTTCATTCACTCAAGAGCCTGTGTAGCAGAAGGGAAAACTGGAGACTAAAGCTTAAGCTTATCAGAGCGTGGAACATGTGTGCCCTTGCGACGCCAAATGTCCCTTATGCCATGAAGCTCCTTTTCGTCGATGAAGAGGGTGAAAAGACTGAGGCTGTTGTGCAGAAGCAATATATGCACCGGTTTGCTAACCATGTAGTAGAGGGACAGGTGTACAAGGTTACTAACTTCACAGTTAATCGAAATGGTGGAAATTTTCGTGCAGCTGGTCATGACTACAAGTTGGGCTTCAACGCTAGCACAAGAGTTGTGTTGTGTGAGAATGCTATCATCCCTTTCCTGGGATTATCTCTGGTCAAGAGTAATGAAATCAGGGATACAAAAGGCTTCTCTAATAACCTCTTCGATTTTATGGGCATTGTTATATCTGTATCAGAAGAACTGAGCATTATCAGAGACCAGGGTGACACACGATTAACGCTGGTTGATTTGGTCGACGAAATGGGACAAATTAGATGTGCATTATTTGGAGACTTGGTTGATACAATGAATGGTCTTCTGGCTCTGCCAAGGGTTGGGCTGCCAGTCATGATCATTCAACTTGCTCGTGTGAACTTGTACAAGGGTTGCATTTCTCACTTTCCGACAATTATAATTTTCAACTGCTGGGCATTGCTTCTTATACCATATAATGACTTATTTTCATTCCAATTTAGGTGA 741 0.4238 MALITNGFHSLKSLCSRRENWRLKLKLIRAWNMCALATPNVPYAMKLLFVDEEGEKTEAVVQKQYMHRFANHVVEGQVYKVTNFTVNRNGGNFRAAGHDYKLGFNASTRVVLCENAIIPFLGLSLVKSNEIRDTKGFSNNLFDFMGIVISVSEELSIIRDQGDTRLTLVDLVDEMGQIRCALFGDLVDTMNGLLALPRVGLPVMIIQLARVNLYKGCISHFPTIIIFNCWALLLIPYNDLFSFQFR. 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca1g04184 246 Pfam Domain of unknown function DUF223 47 114 IPR003871 -
Seca1g04184 246 SUPERFAMILY Nucleic acid-binding proteins 7 115 IPR012340 -
Seca1g04184 246 Gene3D - 7 113 IPR012340 -
Seca1g04184 246 Gene3D - 118 230 IPR012340 -
Seca1g04184 246 CDD RPA1_DBD_A_like 22 110 - -
Seca1g04184 246 SUPERFAMILY Nucleic acid-binding proteins 131 235 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca1g04184 Seca-Chr1 130289862 130293091 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca1g04184 4 216 Core DNA Replication Machinery Family AT5G08020 23.874 3.17e-07 48.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca1g04184 - - lja:Lj6g3v0884310.1 167.933