Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca1g04169 ATGCTAGGTGAAAGGCTTTGTGCCATGTTGCCAGCCCATAGGAAAATGAGTCCAACAGATATAATGGAAATGAACAGCTTGAGAAATGTTGGGATAAGCACACATGATATATATGCTGCATTTGCAAGTCAATCAGGGGGATACCATAAGATTGGATTTCGAAAAAAAGACTTGTATAATCAGATTGCTAGACAGAGGCGTCTTCGAGCATCTGATGCTATAACAGCTATAGAGTACCTTGAAGGCCTTCGTTCCCATGATCCATACTTGTACTACCGACATACCGTTGATGAAGAAGATAGATTACAACACCTGTTTTGGTGTGATGGTATATGTCAAATGAATTACCAAGTTTTTGGTGATGTTTTGGCCTTCGATGCGACTTATGGCAAGAACAAATATCGATGTCCATTGGTGGTATTTTCAGGGGTCAATCACCATAATCGTACAACTATTTTTGCTAGGGCAGTTGTTACTAATGAGACGGAAGAAACATATGTGTGGCTGCTTCAAAAATTTAATGAAGTTATGAAAGGAAAGTCACCAAAATCAGTCATTACAGACGACGATATGGCCATGAGGAATGCAATCAAAAAAGTATTTCCAAATGCTCATCACCGATTATGTGCTTGGCACTTACTTCGCAATGCCACCAGTAATGTTGGAATTCCTGATTTTATTTCTGATCTAAAGAGAACCACATCTCGATGTGAAAGTCTTCATGCTCAGCTTGGTAAGTTTGTGAACTCACGGAATAACCTTACAGAGTTTATTCAACATTTCCAACGTGCCCTTAATTACATGAGATTTAAGGAAGAAGAAGATGACTTTGCCTCTATTCTTGGTGAGGTTGTGTTGAAGACAAATTACCATCCATTAGAGCGAGAGGCAGCAATGTGCTCCATATACACCATTTCAAAATATCAGGGTGGTGGAAGAGAGTGGTATGTGTCATTTTACTCACCAACTATTGAGTTCACATGCACTTTCCAGAAAATGGAATGCTATGGACTTCCTTATAAGCATGGTGAACAATTCGCCCAAGAAAATATCGAGTCTCAAATCTTGGATGGGAATTTGCGGAATCCAGCCAATGTAAGGTCGAAAGGGTGTGGAACTAGATTTGGTTCTGGAACTACAAGAGGCAGGCGCTTGAACAAGTGTAGTGTTTGTGGGGTTGTTGGCCATAACAAGAAATCTTGCCCACAACAAAGGCCCGTTAATGATGCCGACCCATCTATGTGTGGCAACTCAATGCGAGAGTGTTGTTCTCAGTTGAATGATAATCCACCACTACAGGCATCCAATTGTTGGTGCTCTGCTTGGCTTTTTAGTAGCCTGTATCTGTTGTCAAGCTTGTCTTGTGGGGACTTAGGTGATTTTATTGTCAGTTTTGATCAACCTGTATTGATAGCACTATTTGTTGTGGTGCAGCCTTCTGGTCATTTTAAAGACTCACACTGGAAAAGAGGAAACCCGACATCCGGCTTGGCCCTTCGTATGTATCTAGGAACAGAAGTGAATGAGCATACTAACGATGAAGGAGATGTCAAATTAAGGGACAAAACCGAGGGTTTCCTCTACAATTTTCGAGTTCAAGAGTCTATGCATCCCCTTCGAGGAAAGAAAAACCGGGGTCATTCTATGATTATGCTTTCCCTCTTTGATCCTGAAGCTTATTCCCTAATAGCCACCCGTCGTCTTCATCGTCTTCGTCATTGTAGAGTAGAGGGACAATCTGGACTGGTTCGCCACCGTATTGTCAAACTTCGATCGTTCTTTCGTGGAGGAGAGGAGCGGTATCATTTTGTTGCGTTCGTTCGAAGAGGGGAGGGTCAAATAAATTTGATCATGGAAGGTTCAACGGAGCATTCTCATTCCCGGTCAAGGATGGAAACTTTGGAAGATAATGAGGATGAGGTTTCAAATGGAATTTCTGTTGACAATGAAGATACTAATTTGAGTGAGGAAGATGAAGGGGCAGAGGGAAGTGAGCAAGGAGATGTTAGGAACGTTAATCGTGATGGTGAAGATCTGGTCGATCAATTTAAGGTTGATGAGGGATTTGATATGGGTATTGTACCGTTTGAAAGCTTCAGTGCTTCTGACATCAAAATGTTCCACTTTAGTTCGCTAGATGTTGCGTTTGAGTTCTACAACACGTATGCCAAAAAGCGGGGATTTGCAGCCCGTAGATGGAATACAGTTAAAAACAAAAAGGATGAGGTGACACAGCAGACCTTTGTTTGCTTTAAGCAGGGGTTTCGTTTGAAAAAGCACTTAATGAGGCAAAATCGTAAGAGAGAACCTAGGACAATGACACGTTGTGGATGTTCTGCGCTATTTCGTATCCATTTTGTGCGAGAGACATGTCGTTGGCATGTTAAAGAATTTTGTGATGTCCATACTCATGATTTGTTATCTGAAAAGTATGTTGGTAGGCTACTTGCCCACCGAAAAATGCATAAGTGTGATGTGATTCAGATGAATATCATGAGGGATGTGGGCATTGGGGTGACCCAAATTTTTGGTTTAGCTGCAAACCAGTCCGGTGGCTACGAAAGGTTGGGGTTTAGGAAAAGAGATATGTATAATGAGATTGAAAAGCAAAGGCGTATGGTGGTTAGTGATGTTCGAGCTGCATTTGCATACCTTAGAGAGTTGCGGGCGACTGATACCGCAATGTTTTGGAGACACACGGCTGGCGATGAAGGTAGACTCCAAAACTTGTTCTGGTGTGATGGTAGAAGTCAATCTGATTATTTATTATTTTGTGATGTTGTTGCATTTGATGCCACTTACCGTAGAAATAAATATATGTCTCCATTGGTTGTTTTTGCTGGAGTGAACCATCATAACCAAACAATTGTTTTCGATAGTGGGTTAATTGCAAATGAAACTGAAGATACTTATGTTTGGCTGTTGAAACAATTTGTTGAAGCAATGAAGGGTAAGGTACCATCATCGGTTATCACCGATGGTGATCTATCAATGAGAAATGCTATAAGATTTGTTTTTCCTGCAGCCCACCATAGATTGTGTGCATGGCACCTCCTAAGGAATGCCACTAGTAACATTAGTAACCCACAGTTCATTTCTAAGTTTAGAAGATGTATGCTTGCTGATTATGACATGGGTAGGTTTCGTTTGAAGTGGGATGAGCTAATTAATGAGTTTGATCTTCATGGGAATCAATGGGTAAGAGATCTGTATGAGAAGAAGAAGATGTGGGCCACATCTCATATTAGGGGAAACTTTTTTGCAGGTTTCCGCACAACATCACGGTGTGAAGGCTTGCATGCTCAGGTTGGTAGATATTTTCACTACCGCAACAACTTGTTCGAGTTTCTGAAGCACTTTTCTCGTTACTTGGCTTACACTAGGCAGCGAGAATTGGAGGCTGATTTTGAATCTATTATCGGTGATCCAGTGTTGCAAACACCGTTGGAGGATATTGAGAGGTCAGCGGGTAATTTGTATACAAGAAAGATTTTTTTGTTGTTCAAGAAGGTGCTGGTTAGGGCGTGTGATGTGAAGGTTTTAGGTTGTGAGCAAACACCTAATTCTTTTATTTATATTATGTGTAAACGATTATATGAATCGCGTCAGTGGTATGTGTCAATGGTTCCATCAACACGTGAGTTCAAGTGTTCTTTCTTAAGAATGGAGTCTATTGGAATACCCTGTGAACATGTTGTTGCACTGTTGAATTATTTGGAGATAAAGGAGATGCCTCAATCATTGGTGGTACATAGGTGGACCAAGAATGCTAAACAGGTTGAGGAGTTGAATGATGAGTCAAGTTCTAGAGCTGCAACTTCAACCTTGCGTACTGGAGCAATGTCTTGGTTGGGAGAAGTTCTAATGGGTTAA 3873 0.4118 MLGERLCAMLPAHRKMSPTDIMEMNSLRNVGISTHDIYAAFASQSGGYHKIGFRKKDLYNQIARQRRLRASDAITAIEYLEGLRSHDPYLYYRHTVDEEDRLQHLFWCDGICQMNYQVFGDVLAFDATYGKNKYRCPLVVFSGVNHHNRTTIFARAVVTNETEETYVWLLQKFNEVMKGKSPKSVITDDDMAMRNAIKKVFPNAHHRLCAWHLLRNATSNVGIPDFISDLKRTTSRCESLHAQLGKFVNSRNNLTEFIQHFQRALNYMRFKEEEDDFASILGEVVLKTNYHPLEREAAMCSIYTISKYQGGGREWYVSFYSPTIEFTCTFQKMECYGLPYKHGEQFAQENIESQILDGNLRNPANVRSKGCGTRFGSGTTRGRRLNKCSVCGVVGHNKKSCPQQRPVNDADPSMCGNSMRECCSQLNDNPPLQASNCWCSAWLFSSLYLLSSLSCGDLGDFIVSFDQPVLIALFVVVQPSGHFKDSHWKRGNPTSGLALRMYLGTEVNEHTNDEGDVKLRDKTEGFLYNFRVQESMHPLRGKKNRGHSMIMLSLFDPEAYSLIATRRLHRLRHCRVEGQSGLVRHRIVKLRSFFRGGEERYHFVAFVRRGEGQINLIMEGSTEHSHSRSRMETLEDNEDEVSNGISVDNEDTNLSEEDEGAEGSEQGDVRNVNRDGEDLVDQFKVDEGFDMGIVPFESFSASDIKMFHFSSLDVAFEFYNTYAKKRGFAARRWNTVKNKKDEVTQQTFVCFKQGFRLKKHLMRQNRKREPRTMTRCGCSALFRIHFVRETCRWHVKEFCDVHTHDLLSEKYVGRLLAHRKMHKCDVIQMNIMRDVGIGVTQIFGLAANQSGGYERLGFRKRDMYNEIEKQRRMVVSDVRAAFAYLRELRATDTAMFWRHTAGDEGRLQNLFWCDGRSQSDYLLFCDVVAFDATYRRNKYMSPLVVFAGVNHHNQTIVFDSGLIANETEDTYVWLLKQFVEAMKGKVPSSVITDGDLSMRNAIRFVFPAAHHRLCAWHLLRNATSNISNPQFISKFRRCMLADYDMGRFRLKWDELINEFDLHGNQWVRDLYEKKKMWATSHIRGNFFAGFRTTSRCEGLHAQVGRYFHYRNNLFEFLKHFSRYLAYTRQRELEADFESIIGDPVLQTPLEDIERSAGNLYTRKIFLLFKKVLVRACDVKVLGCEQTPNSFIYIMCKRLYESRQWYVSMVPSTREFKCSFLRMESIGIPCEHVVALLNYLEIKEMPQSLVVHRWTKNAKQVEELNDESSSRAATSTLRTGAMSWLGEVLMG. 1291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca1g04169 1290 PANTHER OS01G0519700 PROTEIN 708 1262 - -
Seca1g04169 1290 ProSiteProfiles Zinc finger SWIM-type profile. 1205 1240 IPR007527 GO:0008270
Seca1g04169 1290 MobiDBLite consensus disorder prediction 638 663 - -
Seca1g04169 1290 Pfam MULE transposase domain 927 1021 IPR018289 -
Seca1g04169 1290 Pfam MULE transposase domain 122 216 IPR018289 -
Seca1g04169 1290 Pfam FAR1 DNA-binding domain 717 807 IPR004330 -
Seca1g04169 1290 MobiDBLite consensus disorder prediction 619 673 - -
Seca1g04169 1290 MobiDBLite consensus disorder prediction 623 637 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca1g04169 Seca-Chr1 129917738 129927875 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca1g04169 MULE 9e-31 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca1g04169 - - tpra:123913749 660.988