Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca1g04167 ATGATGATGGATAATGCTGCTTTGAACGTTTGTCCTCATGCCTGGGATTGGTTCCCCACGGAATACCATCCTCAATTGGTTACCGGCCGCATTCCATGTCTCTTTCTGGAAGAATATGGAGCGACCCTTCAGCCGATTGTGCAGTTCCTGGACCCTAGTGGTAACCTCGTGGACATATCTTTTGAGAGAAGTCGTCATTCCACCTCCTTCACCGACGGCTGGAAGGATCTGAAGACAATCTACCCCATCCGCAGCGGCGCATGGTTATTCCTTCATTTCGCATCCCCTACCTTCATCAACATTGTAATTCTGGACCGTAACCTGGCTGAGATCAACTATCCCACCCCACTAGCCAGATTCTTAAATATCCACACAATTTACAAGACCCCTTCGATAACCACACCACTGGACTACCGCATCATTACCCCCGGTTTGACCCACAAATGA 447 0.4899 MMMDNAALNVCPHAWDWFPTEYHPQLVTGRIPCLFLEEYGATLQPIVQFLDPSGNLVDISFERSRHSTSFTDGWKDLKTIYPIRSGAWLFLHFASPTFINIVILDRNLAEINYPTPLARFLNIHTIYKTPSITTPLDYRIITPGLTHK. 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca1g04167 148 SUPERFAMILY DNA-binding pseudobarrel domain 29 107 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca1g04167 Seca-Chr1 129781343 129782621 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca1g04167 30 114 B3 DNA Binding Superfamily AT4G01580 25.882 1.31e-07 47.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca1g04167 - K12395 mtr:25480725 58.5362