Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca1g04160 ATGCTGCAAGTACCTTCTGCAGATTCTAGAATACTCTTAAGAAGGAGAGAGGAAATTTCCAGAAGATTAGAGAGTGAAGAAGCAACTGCTTATGTATCTTCTGGAGTGAGGGATCATTCCTTTCTAGCTTCTGTTGATCAGTTGTTCCTTCTGCAAGGCTTACCTGGCTGTCATGGGGCAAGATATAGTTTTTATTCGGATTATGCCAAACAACGAGGTTTTGCTGTGAGGAAAGATGATATTGAGCGAAATGAGAAAGGTGATATTGTTAAGCGATATTTAGTGTGTAATAAGGAGGGAACAAGGGACAAGAAACACTTGGAGAGAAAGGACAGAGTGAGGGAGGACAGGCCAATTACTCGTGTGCAGTGCACAGCAAGGAGGAGTGTTTACTTAGATATGAGGAGTGGGAAATGGAAGGTGTCTGCATTCCACGACGATCATAACCATGAGTTAACTCATCCAACGTATGTTCACATGATGCCAGCTTATAGACGATTGAGTGAATCTGATAAAGCTCAAGTTGATACCCTGCATGCAGCCGGTGTGAGAACTTGCCATATTATGAGTTTTATGATTGGACAAAAAGGGGGTCATGGTGAATTAGGTTTCTGTAAAAAGGACATGTATAACCACATTGATAAACAGAAGAGAGCTAATATAGAGGATGGTGATGCATTTGCAGCGCTATGTTATTTGAAGGGAAAGTGTAACAGTGATCCACTAATGCATTGCATGTTCAGGACAACAGACGATGGCAGACTGCAGGACCTATTTTGGTGTGACGGTGCAAGTCGTGTTGATTATCAGTGTTTTGGAGATGTAATAGCATTTGACACGACTTATAAGAAGAACAAATATAACAAGCCTTTGGTTATTTTTTGCGGGTACAACCACTAG 900 0.4133 MLQVPSADSRILLRRREEISRRLESEEATAYVSSGVRDHSFLASVDQLFLLQGLPGCHGARYSFYSDYAKQRGFAVRKDDIERNEKGDIVKRYLVCNKEGTRDKKHLERKDRVREDRPITRVQCTARRSVYLDMRSGKWKVSAFHDDHNHELTHPTYVHMMPAYRRLSESDKAQVDTLHAAGVRTCHIMSFMIGQKGGHGELGFCKKDMYNHIDKQKRANIEDGDAFAALCYLKGKCNSDPLMHCMFRTTDDGRLQDLFWCDGASRVDYQCFGDVIAFDTTYKKNKYNKPLVIFCGYNH. 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca1g04160 299 PANTHER OS01G0519700 PROTEIN 62 289 - -
Seca1g04160 299 Pfam FAR1 DNA-binding domain 63 153 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca1g04160 Seca-Chr1 129611860 129613892 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca1g04160 FAR1 1.6e-20 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca1g04160 - - ccaj:109792835 306.605