Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca1g04139 ATGTGCATCATTGTAACTGCCACTGGAACGTGTTACGTGTCTGTCTTCTATGGCAGAAGAACGAACAAGGGCTCAAAGAAGGGTGCAAAGTTTGTGTCAGCATTGCCAACAAGAGTAGCCGTGAGAATCAAGGAGGATCAAAACCTTGCAGTTGTTAAGATCAGCCCAATAATCACATCATTTCTCTGCTTTTATCTCTCCCAGATTGGTTATCAAGAAGGTTTTGGCCAAATCTCAACAAGAAGGGACGGAGCAGTTGTTAGAAGAGGCATTGGAAGAAGCGAGTTGAAGAATTTGGACCCCTTTCTCATGTTGGATCACTTCTCAGTGTCTCCACCTGGAGGATTTCCTGATCATCCACACAGAGGTTTTTTCAATCTCCTGCTATTAGAAAACTAA 399 0.4336 MCIIVTATGTCYVSVFYGRRTNKGSKKGAKFVSALPTRVAVRIKEDQNLAVVKISPIITSFLCFYLSQIGYQEGFGQISTRRDGAVVRRGIGRSELKNLDPFLMLDHFSVSPPGGFPDHPHRGFFNLLLLEN. 133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca1g04139 132 Gene3D Jelly Rolls 83 124 IPR014710 -
Seca1g04139 132 SUPERFAMILY RmlC-like cupins 76 124 IPR011051 -
Seca1g04139 132 PANTHER PIRIN-RELATED 80 124 IPR012093 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca1g04139 Seca-Chr1 128908396 128909153 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca1g04139 75 124 Calmodulin-binding Proteins AT3G59220 52.000 1.99e-11 57.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca1g04139 K06911 - gmx:100775597 91.6633