LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Seca1g04113	ATGGTTGAGCTTTTGGCTATCATATCAGCTTTCTTCTCAGTCCTGGCATTTGCTTACCTTCTCAAACATCATAACAAACAAAATTCCCCACACAAATTGCCCCATGGAAACATGGGGTGGCCTTTGTTTGGGGAGACTCTTGGCTTCCTCAAGCCTCATAGATCAAACTCCTTAGGAAGATTCTTACAAGAACATTGTTCTAGGTATGGCAAAGTTTTCAAATCACATCTGTTTGGTTCTCCCACCATAGTTTCATGTGACTTTGAGCTCAACTTGTTTATTCTTCAGAATGAAGGGAAACTGTTCCCTGTTGATTACCCCAAGGTAATGCATAACATCTTGGGGAAGTTTTCTCTGCTTCTTGTCACAGGAGATCTTCACAAGAAGCTAAGAAGCACCACTATCAGTTTTGTCAGTGCATCAAAGTCCGCATCCAACTTCCTTAACTGTGTAGAAATGCTTGTAGTGTCAAGGATTAACTCATGGGATCTGAAATGTAAACAAGTTGCTTTCTATAAAGAAGCTAAAAGGTTTTCCATCAATGTTATGCTGAAGCACCTTCTGAATATTAACCCTGATGAGCCACTAGCCACCAAAATCTTAGAAAACTTTGAGAATTACATCAAGGGCTTTGTTTCATTGCCATTAATTATTCCAGGGACTGCATATTCCAAAGCCATGCAGGGCTTGTATCAGGCTAGAAGAAGACTCTCGTTTATTATCAAAGATATTATAATGGAGAGGCGTAAAGGTAACATGGGGCCTGCAGAAGAAGGGGACCTATTGAATTTGATTTTGTCAAAGCAGAACCTATGTGATGAAGAGATGGTGAGCATTGTATTGGACCTCTTGTTTGGGGGTTATGAGACAACTGCTAAACTTCTGTCTATGATTGTCTATTTCCTTGGGGGAGCCCCTATTGCTTTAGAAAGGTTAAAGGAAGAACACCAAGGGATAAGGAAAAGCAAAATGGAGAGGGAGTTACTGAACTGGGAAGACTATAAGAAAATGGAGTTCACACAATATGTGATAAATGAAGCTATGAGATGTGGGAATGTAGTCAAATTTGTGCACAGGAAAGCTGCTCAAGATGTCAAATTCAAAGATTTTGTGATACCAGCAGGGTGGAAGGTTCTTCCTGTCTTGTCAGCTGGACATTTGGATCCCACCCTTTTTGAAAATCCTTTGAAGTTCAATCCCTTCCGGTGGAATGACAATTCGACAAGCAAGAAAGTGGCACCTTTTGGTGGTGGTCCACGACTGTGTCCAGGGGCTGATCTAGCTAAAGTGGAGATAGCATTCTTCCTTCATCATCTTGTCCTTAATTATAGGTGGAAAATGAAGGAAGATGACCACCCACTTGCTTTCCCTTATGTGGAGTTCACGGGAGGGCTGCTATTGGATCTTGAACCCACAGGCACTGCTTTTGGGAAACATACTTGA	1443	0.4151	MVELLAIISAFFSVLAFAYLLKHHNKQNSPHKLPHGNMGWPLFGETLGFLKPHRSNSLGRFLQEHCSRYGKVFKSHLFGSPTIVSCDFELNLFILQNEGKLFPVDYPKVMHNILGKFSLLLVTGDLHKKLRSTTISFVSASKSASNFLNCVEMLVVSRINSWDLKCKQVAFYKEAKRFSINVMLKHLLNINPDEPLATKILENFENYIKGFVSLPLIIPGTAYSKAMQGLYQARRRLSFIIKDIIMERRKGNMGPAEEGDLLNLILSKQNLCDEEMVSIVLDLLFGGYETTAKLLSMIVYFLGGAPIALERLKEEHQGIRKSKMERELLNWEDYKKMEFTQYVINEAMRCGNVVKFVHRKAAQDVKFKDFVIPAGWKVLPVLSAGHLDPTLFENPLKFNPFRWNDNSTSKKVAPFGGGPRLCPGADLAKVEIAFFLHHLVLNYRWKMKEDDHPLAFPYVEFTGGLLLDLEPTGTAFGKHT.	481

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Seca1g04113	480	PANTHER	CYTOCHROME P450 26	30	448	-	-
	Seca1g04113	480	Pfam	Cytochrome P450	34	453	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Seca1g04113	480	FunFam	Cytochrome P450 724B1	28	470	-	-
	Seca1g04113	480	SUPERFAMILY	Cytochrome P450	28	452	IPR036396	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Seca1g04113	480	Gene3D	Cytochrome P450	22	461	IPR036396	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Seca1g04113	480	PRINTS	E-class P450 group I signature	412	422	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Seca1g04113	480	PRINTS	E-class P450 group I signature	275	292	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Seca1g04113	480	PRINTS	E-class P450 group I signature	66	85	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Seca1g04113	480	PRINTS	E-class P450 group I signature	422	445	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Seca1g04113	480	PRINTS	E-class P450 group I signature	381	405	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Seca1g04113	Seca-Chr1	128115440	128118808	Dispersed/Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Seca1g04113	38	367	Cytochrome P450	AT5G14400	54.955	4.54e-129	376

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Seca1g04113	K12639		-	gmx:100791737	771.541

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