Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca1g04025 ATGACAGTCTTTAGCATGACACCTGTTAAGGATCCAGTACTTCCAGTAGACCTCAAAGGAGAAAGTTTCTGTGCTCTCGTAGGAACTCGTTGCAGTGCACTCGAGCTTTTTCTGATTAAAAGAAAGATAAAGGGGCCTTCATGGCTACAGGTTTCAAACTTTTCTACCCGCTCAGCTTCTCAAAGGGTTAGCTGGTGCAAATTTGAAGTGACTGTCGACTCTCCTAAAGACATAAGGATTTCTTCAAATTCCTCAAAATTCACTTTCGAGATTCCTCCTGTGGTTGTCACGGCGATAAACTTGAAAACCACCATAATGAAAAGCAGAACATAA 333 0.4174 MTVFSMTPVKDPVLPVDLKGESFCALVGTRCSALELFLIKRKIKGPSWLQVSNFSTRSASQRVSWCKFEVTVDSPKDIRISSNSSKFTFEIPPVVVTAINLKTTIMKSRT. 111
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca1g04025 110 PANTHER DNA POLYMERASE ALPHA CATALYTIC SUBUNIT 8 105 - -
Seca1g04025 110 Gene3D - 15 82 - -
Seca1g04025 110 Pfam DNA polymerase family B, exonuclease domain 20 104 IPR006133 -
Seca1g04025 110 SUPERFAMILY Ribonuclease H-like 9 104 IPR012337 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca1g04025 Seca-Chr1 123521969 123523414 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca1g04025 10 105 Core DNA Replication Machinery Family AT5G67100 63.542 2.18e-32 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca1g04025 K02320 - cave:132187596 157.918