Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca1g04005 ATGCCAAGTGTGGCTGTGAAGCTCTATAGCGTGTTCTTCAAGTTCCTCTTGAAGCACCGTTTGCAGAATCGGATTCAAGCTCCAACCGAAAACTCAGACCCGTTTGGTGTTACCTCTCGACCCGAAGAATCTGTCGCCGCAGCCAATCCTTCCTTCACCGACGGCGTTGCCACCAAGGACATCCACATCGACCCCTTCACCTCCCTCTCTATCCGAATCTTCCTTCCTGAATCTGCACTATCCCCACCCGAACCTCATTCCAAACCTCACCCACCACCTCCCAAGCCTAGGTCCAACCCTATCCACTCGAAGCCCGATCCCGAACCTGGATCTGCTCGCCTCGATTCGATTTCGCGGCGCAACAGCTATGGCCCCCCTTACCGGGAAGAGCCCCGAGGGAACAGCTTCGGAGCCAGCAACAGCGTCGAGGGTTTGAATTTGATGTCCGGCGCCGGCGGTGGAGGTTACCGCGGATACTCGCCGGCGCTGAACAATCGCCGGAGGAAACTGCCTGTGATGCTGCAGTTTCACGGCGGTGGTTGGGTTAGCGGGAGCAACGATTCCGTCGCTAATGACACGTTCTGCCGGCGGATCGCAAAGCTCTGCGACGTGATCGTGGTCGCTGTCGGTTACCGGCTGGCGCCGGAGAGTCGGTACCCGGCGGCGTTTGAGGATGGGCTGAAGGTGTTGAATTGGCTTGCGAAGCAGGCGAATTTGGCTGAGTGTAGCAAGTCCATGGGGACTGGAAGGGTCGGAGGACATGGTGGTAGTGAGTTTAACAAATCAGATGCTCATAGGCATATTGTTGATTCCTTTGGAGCTTCAGTGGTTGAGCCGTGGTTGGCTACTCATGGAGATCCATCAAGATGTGTTCTTCTTGGAGTAAGTTGTGGTGCAAATATTGCAGACTATGTGGCCCGGAAAGCTGTGGAAGGAGGAAAACTTCTGGACCCTGTCAAGGTGGTAGCACAGGTGCTAATGTATCCATTTTTTGTTGGAAGTGTTCCCACACATTCTGAAATAAAGTTGGCAAACTCCTACTTTTATGACAAGGCCATGTGTATGCTTGCATGGAAACTTTTCCTACCTGAGGAAGAATTTAGTTTGGACCATCCAGCTGCTAATCCCCTTGTCCCAGGCCGGTCTCCTCCTTTAAAGCTGATGCCTCCAACAATGACAGTGGTGGCAGAACATGACTGGATGAGGGATCGTGCCATTGCTTACTCAGAGGAGCTCCGGAAGGTGAATGTTGATGCACCTGTTCTTGAGTATAAGGATGCAGTACATGAATTTGCAACACTAGACGTACTTCTCAAAAGCCCTCAGGCCCAGGTTTGTGCTGAGGACATTGCCATATGGGTCAAGAAATATATTTCACTTCGAGATGAACTGACATCTTGCTTGCAATATAAATATGCCATGGTCATATATGATTGCCTCGGTGCTATTATCCCTAATCTTTTGAGGTCAAGTTTGGCTTGTTGGCCCCAATATTGGAAGCACTTTGAGGGTGAGGGTAGCCACCCTATGGTATGTGCTCAGATTGATCAATCTGTTAAATTTTCTGGGCGTATACTATACTCGTGTCGGTGGCACCTCTGTCGACTGTTCTGGAACCATGAGTTCCAGGACTTAGACGAATCTTTGGTTGCCTAA 1656 0.5109 MPSVAVKLYSVFFKFLLKHRLQNRIQAPTENSDPFGVTSRPEESVAAANPSFTDGVATKDIHIDPFTSLSIRIFLPESALSPPEPHSKPHPPPPKPRSNPIHSKPDPEPGSARLDSISRRNSYGPPYREEPRGNSFGASNSVEGLNLMSGAGGGGYRGYSPALNNRRRKLPVMLQFHGGGWVSGSNDSVANDTFCRRIAKLCDVIVVAVGYRLAPESRYPAAFEDGLKVLNWLAKQANLAECSKSMGTGRVGGHGGSEFNKSDAHRHIVDSFGASVVEPWLATHGDPSRCVLLGVSCGANIADYVARKAVEGGKLLDPVKVVAQVLMYPFFVGSVPTHSEIKLANSYFYDKAMCMLAWKLFLPEEEFSLDHPAANPLVPGRSPPLKLMPPTMTVVAEHDWMRDRAIAYSEELRKVNVDAPVLEYKDAVHEFATLDVLLKSPQAQVCAEDIAIWVKKYISLRDELTSCLQYKYAMVIYDCLGAIIPNLLRSSLACWPQYWKHFEGEGSHPMVCAQIDQSVKFSGRILYSCRWHLCRLFWNHEFQDLDESLVA. 552
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca1g04005 551 MobiDBLite consensus disorder prediction 78 139 - -
Seca1g04005 551 MobiDBLite consensus disorder prediction 28 51 - -
Seca1g04005 551 MobiDBLite consensus disorder prediction 82 100 - -
Seca1g04005 551 Gene3D alpha/beta hydrolase 149 465 IPR029058 -
Seca1g04005 551 PANTHER ARYLACETAMIDE DEACETYLASE 40 433 - -
Seca1g04005 551 Pfam alpha/beta hydrolase fold 173 432 IPR013094 GO:0016787
Seca1g04005 551 SUPERFAMILY alpha/beta-Hydrolases 156 458 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca1g04005 Seca-Chr1 122617789 122623452 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca1g04005 1 461 Carbohydrate Esterase AT3G27320 72.629 0.0 656
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca1g04005 - - gmx:100791894 755.362