Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca1g03983 ATGCAAGGGCTTCATCAAAGCAAGGAGAACTTTCAGGCTTGGTGGCTTTGGTTTTGTGGGTTTCTCTCCTCTCATTATCACTGTTTTAAGACATGTTTGGTAGAAATGAAAATTGGGGGAATCAAAAGGCAAGATTTCAGCACTCATTATGTATTTCCAAAAGGTTCCACTCTAGCTGTTGACATATCTGAGGCATTGCTGAATGTGATAGAGAGTGGAGAAACAGAACAACTAGAAAAAGATATGCTGAATATGATAATGAGTGGAGGGAATGCAAGTTGCTATCCTTTAGAGGGCAAGGAAAAAGACAAAGTTTCCATAGGATTTCAACCTTTCCTTGGACTATTTTGCATATCTTCTACTGTTGCTATTGTGGCATTTTTATATTTTATGTTTTGTTTTTTCATGAGATGGACAACCACATATTTTGCCCGGTGCTATTCAAAACTCCAATCAAGGAGCATGAGAAGGGTAAGCACTGCCACAGAAACAGGAAATGCAGAGGAGACAGTCACTAACACCCAGCAGAGCCTTGTTGGCCTTGTTGGTATAGTACTGGCTGCATGCTTCATGAAGTATTCATATTTCATACTGAGACAAGGGTGA 606 0.3993 MQGLHQSKENFQAWWLWFCGFLSSHYHCFKTCLVEMKIGGIKRQDFSTHYVFPKGSTLAVDISEALLNVIESGETEQLEKDMLNMIMSGGNASCYPLEGKEKDKVSIGFQPFLGLFCISSTVAIVAFLYFMFCFFMRWTTTYFARCYSKLQSRSMRRVSTATETGNAEETVTNTQQSLVGLVGIVLAACFMKYSYFILRQG. 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca1g03983 201 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 24 158 IPR015683 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca1g03983 Seca-Chr1 121000032 121005258 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca1g03983 21 135 Ion Channels AT5G27100 30.833 5.81e-08 50.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca1g03983 - K05387 gmx:100778941 154.836