Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca1g03945 ATGCACTTGATGGGAGATGCCTTAAGCACACTGACTGTGAAGGAACTTAAGCAGCTAGAGAACATACTTGAAAGAGGAATTACTAGAATCAAATCTAAGAAATTTCATATTGTGTAA 117 0.359 MHLMGDALSTLTVKELKQLENILERGITRIKSKKFHIV. 39
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca1g03945 38 Pfam K-box region 2 37 IPR002487 GO:0003700|GO:0005634|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca1g03945 Seca-Chr1 119875748 119877285 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca1g03945 2 38 MADS-box Gene Family AT4G09960 62.162 1.24e-10 51.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca1g03945 K09264 - gmx:100785089 62.3882