Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca1g03942 ATGATGGGGTTCCTTATGAAGGGAAAACATTTAATAGTGACAATGGTATTTATGAATTTTATTATGTATTTGCACAAAAAAACTAACTTTTCGATTAGACATTATCATATCTATAAATCTAGTAAGAATCAATTCGAGGAGAATCCATTGGGTATTTATAAAAGGGAATTTGTTTGTCATCGTCCTGGTTTTGTTAAACAACACAGAGTTATTGAAGAGGAAATTCAAAGGAAAAAGAAAACTTTAAGATGTAATTGTGGTGCAAAAATGTTGATTAGAAAAAGAACAATTGGCTTTGAGGAAAATGGGTTGTTAAATATTTTAATAATCACTACAACCACGAGTTATTAG 351 0.2906 MMGFLMKGKHLIVTMVFMNFIMYLHKKTNFSIRHYHIYKSSKNQFEENPLGIYKREFVCHRPGFVKQHRVIEEEIQRKKKTLRCNCGAKMLIRKRTIGFEENGLLNILIITTTTSY. 117
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca1g03942 116 Pfam FAR1 DNA-binding domain 41 96 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca1g03942 Seca-Chr1 119497142 119497492 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca1g03942 FAR1 6.6e-08 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca1g03942 - - ccaj:109802755 121.709