Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca1g03898 ATGGCTCCCATATTTGTTGTTGCTTCCAACAGAGGCATCACCGCTCCTCTTCATGCGCAAAAGTTGTTTGATATTTTGTGTCATCGAGGTCTTCACGACTTGATTTCTTGGAGAGGTAACACAGCTAATGTCCTCCATTATTTTCCCACTCAGGCTTTAAACTTTGCACTTAAGGACTACTTCAAGAGGTGTTTCAATTTCAAGAAGGATAATAATGGTTACTGGAAATGGTACCACTGTTATTGTCACCGGGGATGCTTTCGTCCTCCTCAAGGATCAGATCCATCTCTAGACCTCCGATCCCCATGTTTAGATAGCAAATTCCTTCTAAATTATCGTCGTATTGGAAGAACGAGCTCACGGCCACCACTTCTCTGCCAAGAAGGAGTGGGTTCTCTTGAGATCGAAAGCGATGACACCTTTTCAGCCTTTGAAGATCGCTTTTCGGTTCCTACACTGCTTCAAGACTCTCTTCGCATTGCAGTTGAGGTGGTGATTGAAATGGAGGAAACTGGAATGGATGGTAGTGCACCTGTTAATCAATACTGGCACGAATTTTCGAAGTTTTTTCAATATTATTTGGAGAATAAGATAGCTCCCATATTAGTTACTGCTGCCAACAGAGGCATCGTTGTTCCTCTTCATGTGCAGAAGCTGTTTGATGTTGTGTCATCGAGGTTTTTCAATTTCAAGAAGGACAGTGATGGTTACTGTAAATGGTTTGTGGGCAATTTGACCTCTGGAGGTGCTACTGGTGTCTCGTCCTTTTGA 771 0.4306 MAPIFVVASNRGITAPLHAQKLFDILCHRGLHDLISWRGNTANVLHYFPTQALNFALKDYFKRCFNFKKDNNGYWKWYHCYCHRGCFRPPQGSDPSLDLRSPCLDSKFLLNYRRIGRTSSRPPLLCQEGVGSLEIESDDTFSAFEDRFSVPTLLQDSLRIAVEVVIEMEETGMDGSAPVNQYWHEFSKFFQYYLENKIAPILVTAANRGIVVPLHVQKLFDVVSSRFFNFKKDSDGYCKWFVGNLTSGGATGVSSF. 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca1g03898 256 PANTHER ADP,ATP CARRIER PROTEIN 1-RELATED-RELATED 37 79 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Seca1g03898 256 Gene3D Mitochondrial carrier domain 6 86 IPR023395 -
Seca1g03898 256 SUPERFAMILY Mitochondrial carrier 29 74 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca1g03898 Seca-Chr1 117777899 117781812 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca1g03898 37 78 Antiporters AT5G13490 83.333 2.61e-20 87.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca1g03898 K05863 - nnu:104599424 87.8113