Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca1g03870 ATGATTCTCATCCTAATTTTTGCTGAAGCTCTCGCCATGTATGGCCTCATTGTTGGTATTATCTTGTCTTCTCACGATGGCCAGTCTCGAGCAAATTGA 99 0.4242 MILILIFAEALAMYGLIVGIILSSHDGQSRAN. 33
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca1g03870 32 Gene3D - 1 29 IPR035921 -
Seca1g03870 32 SUPERFAMILY F1F0 ATP synthase subunit C 1 23 IPR035921 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca1g03870 Seca-Chr1 116015487 116015585 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca1g03870 1 32 Primary Pumps ATPases(2) AT4G38920 87.500 2.92e-12 53.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca1g03870 K02155 - sspl:121756212 53.9138