Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca1g03829 ATGGAGATCATAAAGATAGTATTAATGGCTGTGATTATGGCTTTTACTCTCATATCAAGTGGAGAAGGGCAATTAGTAGAGAATTTCTACGGTTCAACTTGTCCTAATGTAGAATCCATTGTGTCCCAGGCTGTGACCACCAAGTTTACACAGACCATCACAACAGGACAAGCCACTCTGCGTCTATTTTTGCATGACTGCTTTGTTGAGGTGGGATGTGATGCCTCTGTTATGATCTCCTCACCAAATGGGGATGCAGAGAAGGATGCATCGGAAAATCTTTCCCTACCTGGAGATGGGTTTGACACAGTGATAAAGGCAAAACAAGCAGTGGAAGCTTCATGCCCAGGAGTGGTCTCTTGTGCAGACATTTTGGCACTTGCTACTAGAGACGTTATAGGCTTGCTTGGAGGCCCACAATTCAACGTGGAACTTGGACGTCGAGATGGGCGTGTGTCAAAGGCATCAAGGGTCGAAGGAAACCTTCCCAAAGCAAAATTCAACCTCAATGAACTGAACGCCATGTTCTCCAAACACGGCCTAACCCAAACAGACATGATTGCGCTCTCTGGAGCCCACACCGTAGGATTCTCACACTGCAACGAGTTTGAAAACCGCTTATACTCATTCTCACAATCCTCTCCAGTGGACCCCACTCTGGACTCTACCTATGCACAAGAATTAATGGCAGGGTGCCCTAGAAACCCTGACCCAACCGTAGTGCTTGCTTTGGACCCTCAAACCTCATTCACTTTTGACAATTTGTATTACAAAAACTTGGTTTCAGGGAAAGGGTTGTTGTCTTCTGACCAAGTGCTGTTCACAGACCCAGTATCAAGGCCCGTAGTGGTTGAGTTTGCAAACAACCCAATTAGATTCAACGAGGCCTTTGTAACGGCCATAAGGAAGCTTGGAAGGGTGGGGGTTAAGACTGGTAATGATGGAGAGATTAGGAGAGACTGCTCAAAATTTAATTAG 978 0.4591 MEIIKIVLMAVIMAFTLISSGEGQLVENFYGSTCPNVESIVSQAVTTKFTQTITTGQATLRLFLHDCFVEVGCDASVMISSPNGDAEKDASENLSLPGDGFDTVIKAKQAVEASCPGVVSCADILALATRDVIGLLGGPQFNVELGRRDGRVSKASRVEGNLPKAKFNLNELNAMFSKHGLTQTDMIALSGAHTVGFSHCNEFENRLYSFSQSSPVDPTLDSTYAQELMAGCPRNPDPTVVLALDPQTSFTFDNLYYKNLVSGKGLLSSDQVLFTDPVSRPVVVEFANNPIRFNEAFVTAIRKLGRVGVKTGNDGEIRRDCSKFN. 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca1g03829 325 PRINTS Haem peroxidase superfamily signature 119 136 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca1g03829 325 PRINTS Haem peroxidase superfamily signature 185 200 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca1g03829 325 PRINTS Haem peroxidase superfamily signature 137 149 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca1g03829 325 PRINTS Haem peroxidase superfamily signature 245 260 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca1g03829 325 PRINTS Haem peroxidase superfamily signature 56 70 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca1g03829 325 ProSitePatterns Peroxidases proximal heme-ligand signature. 185 195 IPR019793 -
Seca1g03829 325 Pfam Peroxidase 42 289 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca1g03829 325 PANTHER - 7 325 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca1g03829 325 ProSiteProfiles Plant heme peroxidase family profile. 24 325 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca1g03829 325 CDD secretory_peroxidase 24 324 IPR033905 GO:0004601|GO:0042744
Seca1g03829 325 PRINTS Plant peroxidase signature 137 152 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca1g03829 325 PRINTS Plant peroxidase signature 58 78 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca1g03829 325 PRINTS Plant peroxidase signature 243 258 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca1g03829 325 PRINTS Plant peroxidase signature 299 312 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca1g03829 325 PRINTS Plant peroxidase signature 99 112 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca1g03829 325 PRINTS Plant peroxidase signature 118 128 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca1g03829 325 PRINTS Plant peroxidase signature 184 196 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca1g03829 325 PRINTS Plant peroxidase signature 259 276 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca1g03829 325 PRINTS Plant peroxidase signature 34 53 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca1g03829 325 SUPERFAMILY Heme-dependent peroxidases 24 325 IPR010255 GO:0004601|GO:0006979|GO:0020037
Seca1g03829 325 FunFam Peroxidase 163 304 - -
Seca1g03829 325 FunFam Peroxidase 28 174 - -
Seca1g03829 325 Gene3D Peroxidase, domain 2 163 304 - -
Seca1g03829 325 Gene3D - 28 325 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca1g03829 Seca-Chr1 114272755 114276370 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca1g03829 12 325 Peroxidase AT5G14130 63.057 1.37e-142 405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca1g03829 K00430 - gmx:100791275 520.776