Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca1g03823 ATGGGTATGTTTCAGGAGAAGCTTGTGTCTTTCTACAAGAGCAGATGGCTTGTCTTTGTAGCTGCAATGTGGTTACAATCATGGGCAGGTATTGGATACTTGTTTGGAAGCATATCACCTGTCATAAAGAGTTCCCTTAACTATAACCAGAAGCAGCTTTCTATGTTGGGTGTGGCTAAGGACCTTGGTGATTGTGTTGGGTTCATCACTGGGATATTATGTGAGATTTTGCCTATCTGGGGTGCTCTCCTTGTTGGGGCTACTTTGAACCTTGTTGGGTATGGTTGGGTGTGGTTGATCGTCACTGGTCGAGTTGCAGCTCTTCCTTTATGGGCTATGTGTGTTCTTATATTTGTAGGAACAAATGGTGAAACCTACTTCAACACAGTTTCTTTGGTCTCTTGTGTACAAAATTTCCCCAAAAGCCGGGGTCCTGTGGTTGGAATTCTAAAGGGATTTTGTGGGTTGGGTGGTGCAATCTTGACACAAATATATGCAGTTATCCATTCCCCTGATCATGCATCATTGATATTCATGGTTGCTGTAGGTCCAGCATTGGTAGCAATAGGTCTTATGTTCTTTGTTAGACCTGTTGGAGGTCACAAACAAGTGCGGCCATCAGATGGAAAATGCTTCACATTTGTCTATGGTGTGTGCCTTCTATTAGCTGCTTATTTGATGGGAGTAATGGTTGTCCAAGATCTGGTTGATGTGAGTGAAACTGTTATCACAGTGTTCACAGCTATCCTCATTTTGATTCTCTTTGTCCCCATTGTAATCCCTATCTCATTGACTTTCGGCCCCGAGCAAAAGGCTCCAGAGGAAGAGGCATTTCTTCCAGAACCACAGAATAAAGATACAGGGAAATCTCAAGTGGATTCTGATGAAGTAATATTAAGTGAGGTGGAAGATGAGAAGCCTAAGGAAGTGGACTTGCTTCCTGCATCAGAGAGGCAGAAACGTATAGCACAATTACAATCAAGACTACTCCAAGCAGCAGCAGAAGGAGCAGTGAGGGTTAAGAGAAGAAGAGGACCACATAGAGGGGAGGACTTTACCTTGACACAAGCTTTGATTAAAGCAGACTTTTGGCTTCTTTTCATTTCAATGGTCTTGGGTTCTGGATCCGGATTGACTGTAATTGACAATCTGGGTCAGATGAGCCAGTCTCTAGGATATGATAATGCTCATATATTTGTCTCCATGATCAGTATTTGGAACTTCCTTGGCCGTGTTGGAGGCGGTTACATATCTGAGGTTGTTGTAAGGGATCATGTCTATCCAAGACCAGTTGCATTGGCTGTGTTTCAAGTTATTATGACTCTTGGCCATGTTTTCATTGGTATGGGATGGCCAGGTGCAATGTATATTGGCACTTTACTTGTTGGACTTGGTTATGGGGCTCACTGGGCAGTTGTTCCAGCTACTGCCTCTGAGTTGTTTGGTTTAAGAAACTTTGGTGCATTGTACAATTTCATCACACTGGCAAACCCTGTAGGAACTCTTGTCTTCTCTAGTCTCATAGCTAGCAGAATCTATGATTATGAAGCAGAGAAACAAGCTCATGGTGGCCTTCACCAGAATATAGGATCACTTGTGTCACGTGTGCTTAATGTTGGTCAGCCATTAAAGTGTGAAGGTTCTGTATGCTTTTTCCTAACTTCCATTATCATGGCAGCATTATGCATTGTTGCAGCAGGCTTGTGTATGGTTCTTGTATTCAGAACTAAGACTGTTTATGCCAACCTATATGGAAAATCTTCTACTAATAGGCTTCGATAA 1782 0.427 MGMFQEKLVSFYKSRWLVFVAAMWLQSWAGIGYLFGSISPVIKSSLNYNQKQLSMLGVAKDLGDCVGFITGILCEILPIWGALLVGATLNLVGYGWVWLIVTGRVAALPLWAMCVLIFVGTNGETYFNTVSLVSCVQNFPKSRGPVVGILKGFCGLGGAILTQIYAVIHSPDHASLIFMVAVGPALVAIGLMFFVRPVGGHKQVRPSDGKCFTFVYGVCLLLAAYLMGVMVVQDLVDVSETVITVFTAILILILFVPIVIPISLTFGPEQKAPEEEAFLPEPQNKDTGKSQVDSDEVILSEVEDEKPKEVDLLPASERQKRIAQLQSRLLQAAAEGAVRVKRRRGPHRGEDFTLTQALIKADFWLLFISMVLGSGSGLTVIDNLGQMSQSLGYDNAHIFVSMISIWNFLGRVGGGYISEVVVRDHVYPRPVALAVFQVIMTLGHVFIGMGWPGAMYIGTLLVGLGYGAHWAVVPATASELFGLRNFGALYNFITLANPVGTLVFSSLIASRIYDYEAEKQAHGGLHQNIGSLVSRVLNVGQPLKCEGSVCFFLTSIIMAALCIVAAGLCMVLVFRTKTVYANLYGKSSTNRLR. 594
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca1g03823 593 SUPERFAMILY MFS general substrate transporter 212 577 IPR036259 -
Seca1g03823 593 SUPERFAMILY MFS general substrate transporter 9 201 IPR036259 -
Seca1g03823 593 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 16 581 - -
Seca1g03823 593 Pfam Nodulin-like 15 262 IPR010658 -
Seca1g03823 593 Coils Coil 315 335 - -
Seca1g03823 593 CDD MFS_Mch1p_like 14 566 - -
Seca1g03823 593 Gene3D MFS general substrate transporter like domains 355 580 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca1g03823 Seca-Chr1 113993260 113997705 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca1g03823 5 589 Nodulin-like Gene Family AT5G14120 71.769 0.0 837
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca1g03823 - - aprc:113861924 1043.49