Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca1g03802 ATGGAATTTGAGTCCCGGGAAGATGCTTATTCATTCTACACTCGTTATGCTAAATTTGTTGGATTTGGCGTGTCAATTAAAACTAGTCGCCATTCAAAGTGTTTTAGAGAATTTATTGATGTGAAATATGCTTGCACGAGATATGGGAAGAAACGAGAATCTACAACACTTAATCCACGTCCTTGTTTCAAGGTTGAATGTGATGCTAGTTTACATATTAAAAGAAGTTGTAATGGAAAATGGGCTGTTCATAGCTTCATCAAAGATCACAATCATGAGCCTTTTCCAGCATATGCACACTATTTTCCTTGCCATAGAGGCATCAATCAAGATCAAAAGCAATGCATTGAAACTTTGCAACATGTTGGAGTGAGAACAAGCAAAATTTATGCCACGATTGCCAAACAACATGGAGGATATGAAAACATTGGCTGCTTGGAGAAAGATATTAGAAATCATTTGGATAAGAGTCGTCGTTTGGATTTAGAATCAGGAGATGCAAATGTAATGTTGGAGTGTTTTATGCTTATGCAAGAAGAAAACCCAAGATTTTTTTATGCAATAGATTTGGATGATGAAGATCGTGTGAAAACTATATTTTGGGTGGATGCAAAAGGTAGAGATGACTATGAAGAGTTTGGAGATGTAATTTCATTTGATACAACATACATCACAAATAAGTATATAATGCCTTTTGCTCCATTTATTGGGGTGAATAATCATTTTCAGTCAAGGGGTAGAAAGCCTCCAAATGCAATAATTACAGATCAAGATAAAGCAATGAAATCAGCTATCAAAGAGATATTTCCAAGTGCTCGACATCAATTTTGTCTTTGGCATATACTGAGAAAGGTCCCTGAGAAGCTTAGTCATGTATTAACAAAACATGAAGATTTAATGACATTTCTTAACTCATGCATTTACAAGTCTTGGTCAAATAAGCAATTTGAAGATAAATGGCAAGAAATGGTTGAAAAATTTGAATTGTGTGGGCATGAATGGATTCAATCTTTATTTGAAGAATGA 1026 0.346 MEFESREDAYSFYTRYAKFVGFGVSIKTSRHSKCFREFIDVKYACTRYGKKRESTTLNPRPCFKVECDASLHIKRSCNGKWAVHSFIKDHNHEPFPAYAHYFPCHRGINQDQKQCIETLQHVGVRTSKIYATIAKQHGGYENIGCLEKDIRNHLDKSRRLDLESGDANVMLECFMLMQEENPRFFYAIDLDDEDRVKTIFWVDAKGRDDYEEFGDVISFDTTYITNKYIMPFAPFIGVNNHFQSRGRKPPNAIITDQDKAMKSAIKEIFPSARHQFCLWHILRKVPEKLSHVLTKHEDLMTFLNSCIYKSWSNKQFEDKWQEMVEKFELCGHEWIQSLFEE. 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca1g03802 341 PANTHER OS01G0519700 PROTEIN 1 341 - -
Seca1g03802 341 Pfam MULE transposase domain 245 283 IPR018289 -
Seca1g03802 341 Pfam FAR1 DNA-binding domain 11 93 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca1g03802 Seca-Chr1 112995279 112996382 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca1g03802 FAR1 4.9e-22 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca1g03802 - - mtr:120578282 574.704