Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca1g03799 ATGGATTTAAATAGTGATGATTCGGCTGTTAATCTGGAAGATGATAGAGACCTAAGTTATAGTGATTCTTCTAGCTCTAGCGATGATGAGAATCATAATGAAAATGATAGAGTAACAGATACTGAGGATGAAGTTAATGAAGAAGAGGTAGACACTGATGAGGTAAATGAATTTATGGATGCAGAAGTTGGAGGGGAGGTGTCAAGGAGGATAATTGATTTGACAAATGATGATATATGGGCATTGGAATTCTGTACTGAAAATGATGCGTTCAATTTTTACTTTTCTTATGCAAAATGTCATGGATTTGCTGTGAGGAGGGATGATGTAATTAAAGACAGTAAAGGTATGGTCATAATGCGACAGTTCTTATGTAGTAGGGCTGGTTTGAGGGACAAAAAGCATTTAATTAGATTAGATCGGAAAAAGGAACATAGGCCTCTTACTCGAACAAATTGTCTAGCTAAGTTGAGGGTTCGCTTTGATTTTAAGACTAGGAAATTTAAGGTTGTTTCCTTTTTAGACTCTCATAACCATGATTTGACCCCTGCTAAATTTGTTCCTTTAATGCCTGCATATCGTGGTTTGAGTGATGGCGACAAAGCCCAAGTTGATGCATTGCATTCTCATGGTGTTAGACCTTGTCAAATAATGGGTTTTCTTGTTGATCAAAAAGGAGGATATAGAAACGTTGGTTTTTCAAAGAAAGATTTATACAACTACATAGATGAGGTTAGGAGGGGTAAGATAAAAGATGGGGATGCAGTGGCTGGGTTAAGTTATTTGCAAGGAAAGGCAGATAACAATCCAATGTTTTTTTTCAAGATTTTTATGTTCTGA 840 0.3631 MDLNSDDSAVNLEDDRDLSYSDSSSSSDDENHNENDRVTDTEDEVNEEEVDTDEVNEFMDAEVGGEVSRRIIDLTNDDIWALEFCTENDAFNFYFSYAKCHGFAVRRDDVIKDSKGMVIMRQFLCSRAGLRDKKHLIRLDRKKEHRPLTRTNCLAKLRVRFDFKTRKFKVVSFLDSHNHDLTPAKFVPLMPAYRGLSDGDKAQVDALHSHGVRPCQIMGFLVDQKGGYRNVGFSKKDLYNYIDEVRRGKIKDGDAVAGLSYLQGKADNNPMFFFKIFMF. 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca1g03799 279 Pfam FAR1 DNA-binding domain 92 182 IPR004330 -
Seca1g03799 279 MobiDBLite consensus disorder prediction 9 39 - -
Seca1g03799 279 MobiDBLite consensus disorder prediction 1 52 - -
Seca1g03799 279 PANTHER OS01G0519700 PROTEIN 81 276 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca1g03799 Seca-Chr1 112837685 112838524 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca1g03799 FAR1 2.7e-18 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca1g03799 - - ccaj:109794460 276.559