Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca1g03797 ATGTTGGATGCTTCAAACTCTAGTGAGGAATTAAATATCGAACCTTGTATTGGAATGGAATTTGAGTCTATTGAAAAAGTTAGAGAATTTTATAATTCATTTGCTAAGAAGAAGGGTTTTGGAGTACGTGTTTATTTAACTAAACCAAAGAGAGCTGTCTTGGTATGTTGCAATGAAGGTAAACACAAAGTGAAAACCGCTGAAAATGAAGAAATTCAAGATAGCAATACTCAAACTAAAAGAAAGTGCTCGACTACTCAAAGTGGTTGTCAACCTTCACTTATTGTTTCAAGAGGCACAACACAAAGCAGCTGGATCATACAATCTTTTAATAATGATCATAACTATGTTATGGTTAGCCTCATAAGTGTGTCTTACATGAGGTGTCATAACCATGTTAAGGTTAGCCCCAGAAGTGGATTATACATTCATTGTTGA 438 0.3447 MLDASNSSEELNIEPCIGMEFESIEKVREFYNSFAKKKGFGVRVYLTKPKRAVLVCCNEGKHKVKTAENEEIQDSNTQTKRKCSTTQSGCQPSLIVSRGTTQSSWIIQSFNNDHNYVMVSLISVSYMRCHNHVKVSPRSGLYIHC. 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca1g03797 145 MobiDBLite consensus disorder prediction 68 89 - -
Seca1g03797 145 Pfam FAR1 DNA-binding domain 29 118 IPR004330 -
Seca1g03797 145 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 5 136 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca1g03797 Seca-Chr1 112773237 112773674 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca1g03797 FAR1 7.8e-10 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca1g03797 - - tpra:123886791 191.815