Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca1g03756 ATGGAGAAAAACCTTGCTCAAAATTCCGGCAGCTTCGCTCGCAGAGACGAGCACAACAACAACAACGCCGGCGAAACACCGCGTTCTTCCATGCCTGACTCTACAGAAACGGATCCCAAATCTAACGTCGGCGACACCACCGAAGCGGAACCTCCGCTTCCTCCCACGCCTCAAGGAGATCAGACCGACGAGGAGAAGAAAGAAGAGGCCGTGACGTCTCCTCCACCTAGCCTCGAGAAGGTTTCAGAAGACATTGATCAATGGCTGGTGACTCTGCAGCGGAATGATGATAAAAACGAGAAAGGAGGGTCGTTTGAGATCCCTGGCTTCGTGGAGAGGTTCTTGGATCTGGTGGAGGAGAAGATAGCGAAGTATGACATGGGCGAAGGCAAAGGCAAATGGGGAGAGGTGGTGGAGGAGGATTCGTGGTTGTTGGAAACTGTGGATCGGATTTCAAAAGTGGTGAAGTGGTTGAGTCATCATCAAACCTCAGAAGAGATCAACGGTGGAAAAAGAGACTCGCTGGTGAACCGTATTGGCTCCATTCAACAGCGTGCGATGTCGTATTTGGAGGAGGACTTTCGGTGGTTAATGGAAGAATCTAGAAGCCCAACCGAATTGGATCCCGGCGGGAACAATAATAATAACAACCAGAAAGACGATCCCAAAGGGAAGCACGTGGCATCAGAACAACAACAATTCGAAACGAATTTCCCGGGTTACCCGGAGGAGGCCATTACCAGCCTGAGCAAGATCGCCGGCGAGATGTTATCCGCCGGCTACGAATCGGAATGCTGCCAGATTTACATCATGGCAAGGAGGAACGCGTTCGAGGAGATCCAGCAGAAGCTAGGGTTGGAGAGGATCAGCATCGACGAGATGATCCAGAAGGTGCAGTGGGAGACCCTAGCGAGAGACATGATCCCTGCCTGGATCAACACGTTCCGGCAATGCTCCGCCGTGTACTTCCCCGGCGAGAGGAAACTGGCAGAGGCGGTCTTTTCAGGGAATCCGTCCGTCGCAGCAGGGCTCTTCAGCAGCCTCTCTCGCGGCGTGGTGATACAGCTCCTCAACTTCGCGGAGGGCGCCGCCCTGACGAAGCGCGCCGGCGAGAAGCTCTTCAAGCTACTCGACATGTACGAGACGCTCCGCGACGTTATCCCCAAACTAGATGGTTTCTTCCCTGAAGAGTCCGTGGAAGAGGTGAAGACGGAGATGAACGTGGCCAAGTCGCGGCTTGCGGAGGCCGCGATCTCGATCTTCTGCGATCTGGAAAACTCAATAAAATCCGAAACCGCCAAAACTCCGGTCCCCGGCGGCGCTGTTCACCCTCTCACGCGCTACATCATGAACTACCTCAACATAGCAGGGGATTACAAGGCGACGCTAGAGCAGGTTTTCAAGGAGCATTCCAAGATTGAGCGCGCAGATTCCACTAGCAGGCCTCATCATGAAAACGACGTCGTTGCAGAGAAAGAGGCTCCGTCGCCGTTCGCGGCACAGGTGATGAGGGTGATGGAGTTGCTTGACTCGAGCCTGGATGGGAAGGCGAGGCTATACCGTGACGTGGCACTGAGCAACTTCTTCATGATGAACAATGGGAGGTACATTCTGCAGAAGATCAAGGGTTCCTCAGAGATGAGCCAGGTGATGGGTGACACGTGGTGCAAAAAGAGATCCACAGAGCTGAGGAACTACCACAAGAACTACATGAGGGAGACATGGAATCGGGTTCTTTCGTGCCTAAACCTGGAAGGGTTGAGCGTGAATGGGAAGGTGCAAAAGCCAGTGCTGAAGGAGAGGTTCAAGAGCTTCAATGCGCTGTTTGACGAGATTCACAGGACGCAGAGCTCGTGGGTGGTGAAGGACGAGCAGCTTCAGTCGGAGCTTAGGGTTTCGATATCGTCGGTGATTATTCAGGCGTACAGGTGCTTCCTTGGTAGGTTTGCGCAGTATTTGGATCCGGGGAGACAGACAGAGAAGTATATAAAGTACCAGCCAGACGATATAGAGACTTACGTTGAGGAGTTGTTTGATGGGAAGCCTCACCAGTCTATTGCTAGAAGAAAAACATAA 2076 0.5299 MEKNLAQNSGSFARRDEHNNNNAGETPRSSMPDSTETDPKSNVGDTTEAEPPLPPTPQGDQTDEEKKEEAVTSPPPSLEKVSEDIDQWLVTLQRNDDKNEKGGSFEIPGFVERFLDLVEEKIAKYDMGEGKGKWGEVVEEDSWLLETVDRISKVVKWLSHHQTSEEINGGKRDSLVNRIGSIQQRAMSYLEEDFRWLMEESRSPTELDPGGNNNNNNQKDDPKGKHVASEQQQFETNFPGYPEEAITSLSKIAGEMLSAGYESECCQIYIMARRNAFEEIQQKLGLERISIDEMIQKVQWETLARDMIPAWINTFRQCSAVYFPGERKLAEAVFSGNPSVAAGLFSSLSRGVVIQLLNFAEGAALTKRAGEKLFKLLDMYETLRDVIPKLDGFFPEESVEEVKTEMNVAKSRLAEAAISIFCDLENSIKSETAKTPVPGGAVHPLTRYIMNYLNIAGDYKATLEQVFKEHSKIERADSTSRPHHENDVVAEKEAPSPFAAQVMRVMELLDSSLDGKARLYRDVALSNFFMMNNGRYILQKIKGSSEMSQVMGDTWCKKRSTELRNYHKNYMRETWNRVLSCLNLEGLSVNGKVQKPVLKERFKSFNALFDEIHRTQSSWVVKDEQLQSELRVSISSVIIQAYRCFLGRFAQYLDPGRQTEKYIKYQPDDIETYVEELFDGKPHQSIARRKT. 692
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca1g03756 691 Gene3D Exocyst complex component Exo70 135 688 - -
Seca1g03756 691 PANTHER EXOCYST COMPLEX PROTEIN EXO70 115 680 IPR004140 GO:0000145|GO:0006887
Seca1g03756 691 FunFam Exocyst subunit Exo70 family protein 129 686 - -
Seca1g03756 691 SUPERFAMILY Cullin repeat-like 145 679 IPR016159 -
Seca1g03756 691 MobiDBLite consensus disorder prediction 1 82 - -
Seca1g03756 691 MobiDBLite consensus disorder prediction 201 231 - -
Seca1g03756 691 MobiDBLite consensus disorder prediction 1 44 - -
Seca1g03756 691 Pfam Exo70 exocyst complex subunit 310 675 IPR046364 GO:0000145|GO:0005546|GO:0006887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca1g03756 Seca-Chr1 110709280 110711412 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca1g03756 57 691 EXO70 exocyst subunit family AT5G13990 50.531 0.0 640
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca1g03756 K07195 - gmx:100820172 976.081