Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca1g03720 ATGCAAATGGATGAGTTTGGGGACGGTTCATTTATTAACCTAGATGACATTAGTGATCAAAATCATGATTATGGTGAGGACTCTGATATGAATGGTCAGGAAGGTCAGAATGATTTGGGTGGTCCTAGTGTTCGTCAAGGGTTAGGTGAAATAGACCATGGGGATAAAATAATAGAAGACATGAGTGGTGATGACATTAAATGCATGGAGTTTGCTAGTGAAGAGGATGGTTGTCTCTTTTACGAAACATATGCAAAGTGTCATGGTTTTGTTGTTAGGAAAGATGAGGTACACAGAGATTTTAAAGGGATTGTTATCATGCGTCAGTTTGTGTGCAACAAAGAAGGTAGTAGGAACAAAAAACATTTGATGAAGGTGGATAGGAAAAAAGAGCATAGGCCAATAACTCGTGTGAGGTGTGAAGCTAAGCTGAGAATCCGCTTAAATTATAAGACATGTAAATGGAAGGTAGTATCTTTTGTTGAGACTCATAATCATGAGCTTCCCCCTTACACTTATGTGCATTTATATCCTGCTTATAGAGGCCTAACTGATGCTGATAAAGCTCAAGTTGATAGGTTGCACGCATATGGTGTTAGAACATGCCACATAATGGGATACATGTTAGATCAAAAGGGGGGATATGCTTCCCTTGGGTTTTGTAGAAAGGATTTATATAATTATATTGAACGTCAGAAACTTGAAAAGATTAAAGATGGGGATGCACATGCAACCTTATGTTATATACAAGCAAAGGCCAACAATGATCCCACACTTCGTTGTAGTTTCCTTGCTACGGATGATGGTTGTTTGAGAAATTTATTTTGGGCAGATGGGGGAAGTAGGGCTGATTATTATTGCTTTGGGGATGTTCTTGCATTTGACACAACTTATAGGAAAAACCGATATAACAAACCTTTGGTTATATTTTCTGGTTGTAACCATCATGGTCAGACAGTAGTTTTTGGTTGTGCATTGGTTGCTGATGAAACTATTGAAACTTATAAGTGGTTGTTAGAAGAATTTCTTCGTGCTATGTCATATAAACATCCTGCTGCAGTGGTTACAGATGGAGATAGTAGTATGAGAGAGGCTATCAAGCAGGTGTTCCCGAATGCTTCACATCGCCTTTGTGCATGGCATTTGCACAAAAATGCATGTGAAAATGTCAAGAACTCAGGATTCTTGGATGATTTTAAGGTAGCCATGTATTCTAATTTCACTGAGGAAAAATTTTAA 1239 0.381 MQMDEFGDGSFINLDDISDQNHDYGEDSDMNGQEGQNDLGGPSVRQGLGEIDHGDKIIEDMSGDDIKCMEFASEEDGCLFYETYAKCHGFVVRKDEVHRDFKGIVIMRQFVCNKEGSRNKKHLMKVDRKKEHRPITRVRCEAKLRIRLNYKTCKWKVVSFVETHNHELPPYTYVHLYPAYRGLTDADKAQVDRLHAYGVRTCHIMGYMLDQKGGYASLGFCRKDLYNYIERQKLEKIKDGDAHATLCYIQAKANNDPTLRCSFLATDDGCLRNLFWADGGSRADYYCFGDVLAFDTTYRKNRYNKPLVIFSGCNHHGQTVVFGCALVADETIETYKWLLEEFLRAMSYKHPAAVVTDGDSSMREAIKQVFPNASHRLCAWHLHKNACENVKNSGFLDDFKVAMYSNFTEEKF. 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca1g03720 412 PANTHER OS01G0519700 PROTEIN 66 412 - -
Seca1g03720 412 Pfam FAR1 DNA-binding domain 80 168 IPR004330 -
Seca1g03720 412 MobiDBLite consensus disorder prediction 1 46 - -
Seca1g03720 412 Pfam MULE transposase domain 291 385 IPR018289 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca1g03720 Seca-Chr1 108947513 108948751 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca1g03720 MULE 1.2e-29 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca1g03720 - - ccaj:109792835 527.709