Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca1g03711 ATGGCGTTGCCTTCCATCAAGCACACTAACCACCTCAACCGCACCAAACTGGTCATGAGACCCACCGAAGATTCCCCAATGAAGCATCCCTATCCCAGACTCATTCGAATACGTGTCGCTGACGGAGACGCCACAGACTGTTCCAGCGATGAAGAAGAACAAATAACCTATGAGTCTTTCACTCATCGACGAGTTAAAAGCTTCAATTACGAGATCTCTATTGACTCGACTGAGAACGAAGGTGATAATGTTGCTAATTCGAGGAAGAGAAAGAGGGCAAAGTCCATCAGCGCGGAGCTCTGGCGAGTGGGAGTATCCATAGGAAGAAATTCATGGGAGTGA 342 0.4795 MALPSIKHTNHLNRTKLVMRPTEDSPMKHPYPRLIRIRVADGDATDCSSDEEEQITYESFTHRRVKSFNYEISIDSTENEGDNVANSRKRKRAKSISAELWRVGVSIGRNSWE. 114
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca1g03711 113 PIRSF PTI6 1 109 IPR017392 GO:0003700
Seca1g03711 113 MobiDBLite consensus disorder prediction 17 31 - -
Seca1g03711 113 MobiDBLite consensus disorder prediction 1 31 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca1g03711 Seca-Chr1 108750657 108750998 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca1g03711 28 77 AP2-EREBP Transcription Factor Family AT4G11140 44.231 6.48e-07 44.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca1g03711 - - ahf:112732493 87.4261