Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca1g03690 ATGGCTCTCTCAGACTCTTCTTCTCCTCGCCGTAACACTTTGATCCCTTCCTTCCTCTATGGCTCTTCCCCCAAAACCCTACCTCTCCACCAGATCCTCAACTCCTCCGCCGCCCCGGCCGCCACTCAGCCATCTTCCGTCTCCGGCGGATCTCGCGGCAGCGGCCTCATGATTCCGGCTCCCAAAGAGTCTGGCAAGATCGAGATGTATTCACCGGCCTTCTACGCCGCCTGCACTGCTGGTGGAATCCTCAGTTGTGGTCTAACTCACATGGCCGTCACTCCTCTTGACCTCGTCAAGTGTAACATGCAGATTGACCCTACGAAGTACAAGAGCATCTCGTCTGGGTTTGGAGTTTTGCTCAAGGAGCAGGGTGTGAAAGGATTTTTCCGCGGATGGGTGCCTACCTTGCTCGGTTACAGTGCACAGGGTGCTTGCAAGTTTGGATTCTATGAGTTCTTTAAGAAGTACTATTCTGATATTGCTGGCCCAGAGTATGCTAGCAAGTACAAGACTTTAATCTACCTTGCTGGTTCAGCTTCTGCGGAGGTTATTGCTGATGTTGCACTCTGCCCCTTTGAAGCTGTCAAGGTCCGTGTCCAAACTCAGCCTGGTTTCGCAAGAGGTCTTGCTGATGGACTCCCAAAATTTGTCAAATCTGAAGGAACCTTAGGGCTGTACAAGGGATTGGTGCCTTTGTGGGGACGTCAGATTCCATACACGATGATGAAGTTTGCTTCTTTTGAGACCATTGTTGAGCTGATCTATAAGCATGCCATCCCTACACCAAAGAATGAATGCAGCAAAAATCTGCAACTTGGTGTCAGTTTTGCTGGTGGATATGTAGCTGGTGTATTTTGTGCAATTGTGTCTCATCCTGCTGATAATCTTGTCTCTTTTCTGAACAACGCTAAAGGAGCAACAGTTGGTGATGCGGTGAAGAAGCTTGGCTTGTGGGGTCTCTTTACACGTGGTCTCCCTCTCCGTATTGTTATGATCGGAACACTCACTGGAGCCCAGTGGGGAATATACGATGCATTCAAAGTCTTCGTGGGGCTGCCAACCACTGGTGGTCCTGCTCCTCCTGCCTCCGCACCTGCGGAGCTTGCAAAGGCATAG 1119 0.5058 MALSDSSSPRRNTLIPSFLYGSSPKTLPLHQILNSSAAPAATQPSSVSGGSRGSGLMIPAPKESGKIEMYSPAFYAACTAGGILSCGLTHMAVTPLDLVKCNMQIDPTKYKSISSGFGVLLKEQGVKGFFRGWVPTLLGYSAQGACKFGFYEFFKKYYSDIAGPEYASKYKTLIYLAGSASAEVIADVALCPFEAVKVRVQTQPGFARGLADGLPKFVKSEGTLGLYKGLVPLWGRQIPYTMMKFASFETIVELIYKHAIPTPKNECSKNLQLGVSFAGGYVAGVFCAIVSHPADNLVSFLNNAKGATVGDAVKKLGLWGLFTRGLPLRIVMIGTLTGAQWGIYDAFKVFVGLPTTGGPAPPASAPAELAKA. 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca1g03690 372 Pfam Mitochondrial carrier protein 172 258 IPR018108 -
Seca1g03690 372 Pfam Mitochondrial carrier protein 76 159 IPR018108 -
Seca1g03690 372 SUPERFAMILY Mitochondrial carrier 76 346 IPR023395 -
Seca1g03690 372 ProSiteProfiles Solute carrier (Solcar) repeat profile. 170 254 IPR018108 -
Seca1g03690 372 ProSiteProfiles Solute carrier (Solcar) repeat profile. 271 350 IPR018108 -
Seca1g03690 372 PANTHER SOLUTE CARRIER FAMILY 25 (MITOCHONDRIAL CARRIER PHOSPHATE CARRIER), MEMBER 3, LIKE-RELATED-RELATED 57 361 IPR044677 GO:0005315|GO:1990547
Seca1g03690 372 FunFam Phosphate carrier protein, mitochondrial 73 351 - -
Seca1g03690 372 Gene3D Mitochondrial carrier domain 73 351 IPR023395 -
Seca1g03690 372 ProSiteProfiles Solute carrier (Solcar) repeat profile. 73 157 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca1g03690 Seca-Chr1 108086291 108090297 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca1g03690 11 372 Chloroplast and Mitochondria Gene Families AT5G14040 79.570 0.0 584
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca1g03690 K15102 - gmx:548006 622.854