Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Seca1g03644 | ATGTCAGAGCTTCGTGTCCTGTCCATCCCCGGAAACATGTTTTCCGGCGAGATTCCGGCGAGCATAGGGAAACTCTGGGGACTTGAGGTTCTTGAGCTGCAAGGGAACAACTTTTCTGGGAGGGTCCCGTATCAGATGAGTTATCTTGAATCTCTTAGCCTTGTTAATCTCTCTGGTAATGCTTTGTCTGGTTCCGTACCTAGTGGGTTTATTAGTTCTAGGAATGTGAGAATAGTTGATTTATCGAATAATCAATTTTCTGGTCCCATCCCAATGAATGGTTTTGGTGGTTGTGATTCCTTGAACTATTTGAAGCTGTCTCATAACTTTTTGGCTGGGGAGATTCCACCCCAAATTGGGAAATGCAGAAACTTGAGGACCCTTTTGGTTGATGGGAATATATTGGAGGGTAGGATCCCTCCTGAGATTGGGTATGTTGTTGAACTTAGAGTTCTAGATGTTTCTAGAAATAGCCTCACTGGAAGGATCCCTAGAGAGCTGGCTAATTGTATGAAATTGTCTGTGCTTGTGCTTACTGATTTGTTCGATGATCACGGTCTGAATGATGAGGGAAGCTTGGAGGATAGCTTTAGAGGAGAGTTCAATGCCTTTGTTGGGAATATTCCTCATGAAGTGTTGTTGCTTTCAAGTTTGCGGGTTTTGTGGGCGCCGAGAGCGAATCTTGGTGGAAGGTTTCCTGCTGGCTGGACAGATTCATGCTCTCTAAGAGTACTCAATTTGGCAGAGAATTATGTTAGTGGTGTCATCCCTGAGAGTTTGGGGATGTGTAAAAATTTAACTTTCTTGGACTTGAGTTCTAACAATTTAGTGGGATATCTGCCTTCTCAGCAGCTTCAGGTTCCTTGTATGATGTACTTCAATATCAGCAGGAATAATATGTCTGGCATGCTTCCAGGATTTATGAGAGAAAGCTGTCCTGAGAGTAACAACCTTGCTGCACTAGACCCTGCATTCCCAGAGTTGGGAGGTTTTAATGATGCATACTTTAGTAATCCTGTTTTGAGATTCCAAAAGAATGCTCTCATTGGATCAGGTTTTGGAGAGACTATTGTTGTTAGACACGATTTCAGTTGGAACAGTTTTGTGGGATCCTTACCTTTGTTCTCTCTTGGAGATAATCTTTTTACTGCTGGTCGTAATGTTTCCTACATGCTGTCTCTCAATAATAATAAGTTCAATGGAACTCTGCCTTATCAGCTAGTTTCTAATTGCAGTGACCTCAAGACATTGTCAGTTAACTTGAGTGTGAATCAATTATCCGGTGGGCACTCCCAAGCATTGTTTCGGGACTGCCTCCAGTTGACAGATTTTGAAGCAGCATACAACCAGATTGATGGGTCAATTGGACCTGGAATAGGTGACTCGACGATGCTTCAACGTCTTGATTTAAGTGGGAACAAACTATCTGGAGCACTGCCTAATCAGTTGGGAAACCTAAAAAACATGAAATGGATGCTTCTAGGAGGAAACAATCTAACAGGAGAAGTTCCTTCCCAACTTGGTCAATTGACTTCCCTCACTGTCTTGAATCTGTCTCACAATGCCCTAATAGGACCAATTCCAGCAAGTTTGTCAAATGCCGCAAGTCTTGAAATTCTGTTGCTAGATCACAACAACTTTTCTGGGGAGATACCTTTATCTTTTTCTGCTCTTTCCAATCTTGTTCAACTAGATGTTTCTTTCAACAATCTTTCTGGTCATATTCCACATCTTCAACACCCAAGTGATTGTGATTCCTACAAAGGGAATGAACACTTGCACTCTTGCCCTGATCCATACTCCAACTCATCTGCTTCTCTTCCAGTCCCTCTTGAAGTCCATAATTTCCATAGACAGAGGAAAGTAAGGACACTGGTTATTGCTGTGGTCACTTCTGCTTCTGTTGCTCTCTGCACACTTCTGGGAATTGTATTCGTGATATTTTATAGAAGGAGTAAATTTTGTCGCCTTAGCAGTATTAGAAGGCGACAGGTAGTGACCTTTCAAGATGTTCCAATGGAATTGAGTTATGACAGTGTGGTCACAGCTACCGGAAATTTCAGTATCCGGTATCTTATTGGCACAGGTGGCTTTGGGTCAACCTACAAGGCTGAACTGTCCCCAGGTTTTCTTGTTGCCATAAAGAGGCTGTCAATAGGTAGATTTCAAGGCATTCAACAGTTTGAAACAGAAATAAGGACATTGGGGAGAATTCGACACAAGAACCTCGTGACTCTTATTGGCTATTATGTAGGAAAGGTTGAAATGTTCTTAATTTACAACTACCTTTCTGGTGGAAACCTTGAAGCTTTCATACACGACAACTCAGGGAAAAATGTACGGTGGCCAGTTATTTACAAAATAGCAAAAGACATAGCAGAGGCCCTTGCTTACCTTCATTACTCTTGTGTTCCTCGCATAGTGCACCGGGATATCAAGCCTAGCAACATTTTACTTGATGAAGATCTTAATGCCTACTTGTCTGATTTTGGCTTGGCACGACTCCTTGAGGTATCTGAGACCCATGCCACTACTGATGTGGCAGGCACATTTGGTTATGTAGCACCTGAATATGCCACCACTTGCAGGGTTTCTGACAAAGCAGATGTTTACAGCTTTGGTGTAGTGTTATTAGAATTGATGTCTGGAAGAAAGTCACTTGATCCATCATTTTCTGAATATGGAAATGGATTCAATATTGTGCCATGGGCTGAGATGCTAATGAATGAAGGTCGTTGTTCTGAGCTATTTTCATCTGCTTTGTGGGAAGCAGGGCCTAAGGAAAAGTTGTTGGGGCTTTTAAAGATTGCATTAACATGCACAGTGGAGACTCTTTCTATTCGGCCGTCAATGAAACAGGTTCTTGAGAAATTGAAACAATTGAAAAATTGA | 2892 | 0.4205 | MSELRVLSIPGNMFSGEIPASIGKLWGLEVLELQGNNFSGRVPYQMSYLESLSLVNLSGNALSGSVPSGFISSRNVRIVDLSNNQFSGPIPMNGFGGCDSLNYLKLSHNFLAGEIPPQIGKCRNLRTLLVDGNILEGRIPPEIGYVVELRVLDVSRNSLTGRIPRELANCMKLSVLVLTDLFDDHGLNDEGSLEDSFRGEFNAFVGNIPHEVLLLSSLRVLWAPRANLGGRFPAGWTDSCSLRVLNLAENYVSGVIPESLGMCKNLTFLDLSSNNLVGYLPSQQLQVPCMMYFNISRNNMSGMLPGFMRESCPESNNLAALDPAFPELGGFNDAYFSNPVLRFQKNALIGSGFGETIVVRHDFSWNSFVGSLPLFSLGDNLFTAGRNVSYMLSLNNNKFNGTLPYQLVSNCSDLKTLSVNLSVNQLSGGHSQALFRDCLQLTDFEAAYNQIDGSIGPGIGDSTMLQRLDLSGNKLSGALPNQLGNLKNMKWMLLGGNNLTGEVPSQLGQLTSLTVLNLSHNALIGPIPASLSNAASLEILLLDHNNFSGEIPLSFSALSNLVQLDVSFNNLSGHIPHLQHPSDCDSYKGNEHLHSCPDPYSNSSASLPVPLEVHNFHRQRKVRTLVIAVVTSASVALCTLLGIVFVIFYRRSKFCRLSSIRRRQVVTFQDVPMELSYDSVVTATGNFSIRYLIGTGGFGSTYKAELSPGFLVAIKRLSIGRFQGIQQFETEIRTLGRIRHKNLVTLIGYYVGKVEMFLIYNYLSGGNLEAFIHDNSGKNVRWPVIYKIAKDIAEALAYLHYSCVPRIVHRDIKPSNILLDEDLNAYLSDFGLARLLEVSETHATTDVAGTFGYVAPEYATTCRVSDKADVYSFGVVLLELMSGRKSLDPSFSEYGNGFNIVPWAEMLMNEGRCSELFSSALWEAGPKEKLLGLLKIALTCTVETLSIRPSMKQVLEKLKQLKN. | 964 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Seca1g03644 | 963 | ProSiteProfiles | Protein kinase domain profile. | 687 | 963 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Seca1g03644 | 963 | Pfam | Leucine rich repeat | 465 | 523 | IPR001611 | GO:0005515 | |
Seca1g03644 | 963 | SMART | serkin_6 | 687 | 962 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Seca1g03644 | 963 | FunFam | LRR receptor-like serine/threonine-protein kinase RPK2 | 763 | 963 | - | - | |
Seca1g03644 | 963 | Gene3D | Ribonuclease Inhibitor | 358 | 606 | IPR032675 | - | |
Seca1g03644 | 963 | SUPERFAMILY | RNI-like | 2 | 313 | - | - | |
Seca1g03644 | 963 | SUPERFAMILY | Protein kinase-like (PK-like) | 665 | 958 | IPR011009 | - | |
Seca1g03644 | 963 | PANTHER | LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED | 362 | 959 | - | - | |
Seca1g03644 | 963 | CDD | STKc_IRAK | 693 | 961 | - | - | |
Seca1g03644 | 963 | Pfam | Leucine Rich Repeat | 149 | 170 | IPR001611 | GO:0005515 | |
Seca1g03644 | 963 | PRINTS | Leucine-rich repeat signature | 510 | 523 | - | - | |
Seca1g03644 | 963 | PRINTS | Leucine-rich repeat signature | 465 | 478 | - | - | |
Seca1g03644 | 963 | ProSitePatterns | Protein kinases ATP-binding region signature. | 693 | 715 | IPR017441 | GO:0005524 | |
Seca1g03644 | 963 | Gene3D | Phosphorylase Kinase; domain 1 | 650 | 762 | - | - | |
Seca1g03644 | 963 | FunFam | LRR receptor-like serine/threonine-protein kinase GSO1 | 341 | 606 | - | - | |
Seca1g03644 | 963 | Gene3D | Ribonuclease Inhibitor | 195 | 351 | IPR032675 | - | |
Seca1g03644 | 963 | Gene3D | Ribonuclease Inhibitor | 1 | 181 | IPR032675 | - | |
Seca1g03644 | 963 | Gene3D | Transferase(Phosphotransferase) domain 1 | 763 | 963 | - | - | |
Seca1g03644 | 963 | FunFam | LRR receptor-like serine/threonine-protein kinase GSO1 | 1 | 183 | - | - | |
Seca1g03644 | 963 | Pfam | Protein kinase domain | 692 | 888 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Seca1g03644 | 963 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 807 | 819 | IPR008271 | GO:0004672|GO:0006468 | |
Seca1g03644 | 963 | SUPERFAMILY | L domain-like | 205 | 581 | - | - | |
Seca1g03644 | 963 | FunFam | LRR receptor-like serine/threonine-protein kinase RPK2 | 651 | 762 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Seca1g03644 | Seca-Chr1 | 106134481 | 106138700 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Seca1g03644 | 1 | 962 | Receptor kinase-like Gene Family | AT3G02130 | 45.303 | 0.0 | 785 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRR-XV | Seca1g03644 | Pkinase | 8e-42 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Seca1g03644 | - | - | cam:101512699 | 1574.3 |