Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca1g03604 ATGGTCCTATCTTCGGGTGCCTATTTGTTGAAGAAAAACTTCATAAGATGGACAGTTCTTCAGAATGACATCGATTTGCTAAATCCCCCAGTCGAGCTTGAAAAGAGAAAGCACAAGCTCAAGCGTCTTGTTCAGTCACCCAACTCTTTTTTCATGGTATTATACCCACACTCTCTGTTTTTACATGATCCAACTCTTTTTCCATGA 207 0.401 MVLSSGAYLLKKNFIRWTVLQNDIDLLNPPVELEKRKHKLKRLVQSPNSFFMVLYPHSLFLHDPTLFP. 69
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca1g03604 68 Gene3D - 22 60 IPR023407 -
Seca1g03604 68 PANTHER 40S RIBOSOMAL PROTEIN S27 15 52 IPR000592 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca1g03604 Seca-Chr1 105002381 105003883 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca1g03604 19 60 Cytoplasmic Ribosomal Protein Gene Family AT2G45710 80.952 8.07e-20 73.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca1g03604 K02978 - cit:102608679 66.6254