Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca1g03591 ATGATTTATCTGATCATGCCTCCTCGTGATCAAATATCTCGTGTCACTAAAATGTTGGGAGATGAATTTGAACCTTTCAAGTCTATCAATGCCTTGCTTTACCTATGTGATAACAAGTTTCACACAGACGCTCTAAAAGTTCGATTTTATTGTTATGGATGA 162 0.358 MIYLIMPPRDQISRVTKMLGDEFEPFKSINALLYLCDNKFHTDALKVRFYCYG. 54
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca1g03591 53 SUPERFAMILY N-terminal domain of eukaryotic peptide chain release factor subunit 1, ERF1 1 46 IPR024049 -
Seca1g03591 53 Gene3D eRF1 domain 1 21 49 IPR024049 -
Seca1g03591 53 PANTHER PEPTIDE CHAIN RELEASE FACTOR SUBUNIT 1 23 46 IPR004403 GO:0003747|GO:0006415
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca1g03591 Seca-Chr1 104169113 104169274 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca1g03591 22 45 Eukaryotic Initiation Factors Gene Family AT1G12920 79.167 2.90e-09 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca1g03591 K03265 - cpv:cgd6_3380 48.521