Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca1g03572 ATGGGAACTTCTTGTGAAGAAGCTACAACTCTTCTTCGAGACCTGAAGGTAACCATTCACGAAACTTCAATCGTTTTTCCATCCAAGAAAACAGAGAAGAAGTCCTTGTTCTTATCAAACATAGACAAGGTCCTCAATTTCGATGTGAAAACGGTTCACTTCTTTGCTGCAAACAAAGATTTTCCTCCCCAAATAGTGGCCGAGAAGCTGAAGAATGCCCTTGAAGATGCTCTAGTGGCTTATGACTTCTTAGGTGGAAGATTGAAGCTGAACTCTGAAACAAGCAGGTTAGAGATGGATTGCAATGCAGAAGGTGTTGGTTTTGTTGTGGCTTCTAGTGAGTACAAATTGGATCAGATAGGGGACTTAGTTTATCCCAATCCAGCTTTTGCACAACTTGTTCACAAGACTAAGGATTTCCTCAAACCAGGTGATCAGCCACTATGTGTTGTCCAGCTGACATCCTTCAAGTGTGGTGGCTTTGTAATTGGTCTCACAATTAGCCATATCACCTTTGATGGGCTTAGCCGCAGGATTTTCTTGGACAACCTTGCTGCATTGGCTTCTAACAAGCCACTAGCTGTGACACCCTGCCATGACAGGCATCTCCTAGCCGCATGA 621 0.438 MGTSCEEATTLLRDLKVTIHETSIVFPSKKTEKKSLFLSNIDKVLNFDVKTVHFFAANKDFPPQIVAEKLKNALEDALVAYDFLGGRLKLNSETSRLEMDCNAEGVGFVVASSEYKLDQIGDLVYPNPAFAQLVHKTKDFLKPGDQPLCVVQLTSFKCGGFVIGLTISHITFDGLSRRIFLDNLAALASNKPLAVTPCHDRHLLAA. 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca1g03572 206 Gene3D - 13 206 IPR023213 -
Seca1g03572 206 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 23 206 - -
Seca1g03572 206 SUPERFAMILY CoA-dependent acyltransferases 67 192 - -
Seca1g03572 206 Pfam Transferase family 15 205 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca1g03572 Seca-Chr1 103550639 103553122 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca1g03572 15 206 Monolignol Biosynthesis Gene Families AT5G48930 34.694 8.27e-27 104
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca1g03572 K13065 - gmx:100780971 336.65