Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca1g03571 ATGAACCTCAAGGAGAATGCTAAGACCAATAATAGTGGGACACGTGTCACCGGCTTTAGCGCTGTCACCGCTCTTATATGGAAATGCAAGGCTTTATCTGGACCCTATGATCCTAACAGGTCATCCACTATACTCTATGCTGTGGATATTCGTTCAAAATTGAATCCTCCATTGCCCAAATCATATGCTGGGAATGCTGTTTTAACGGCACATGCTACTGCAAAGTGTGACGAATTGGAAAATGGTTCATTCTCAAGGTTGGTGGAGATGGTGGCAGAGGGTGCAAAGAGAATGAGTGATGAGTATGTAAGGTCTATTATAGATTGGGGAGAGTTGTATAATGGTTTTCCAAATGGAGAGGTTTTGGTGTCTTCATGGTTGAGATTAGGGTTTGAAGAAGTGGAGTATCCTTGGGGAAAGCCGAAGTTTTGTTGTCCTGTGGTGTATCATAAGAAGGATATTATACTGCTGTTTCCTCCTATTGGTGGTGGTGATGGGGTAAATATTATAGTGGCTCTTCCTCCTAAGGAAATGGAAAAATTCGAGAGTCTGTTTTACAAGTTCTTGATTTGA 573 0.4188 MNLKENAKTNNSGTRVTGFSAVTALIWKCKALSGPYDPNRSSTILYAVDIRSKLNPPLPKSYAGNAVLTAHATAKCDELENGSFSRLVEMVAEGAKRMSDEYVRSIIDWGELYNGFPNGEVLVSSWLRLGFEEVEYPWGKPKFCCPVVYHKKDIILLFPPIGGGDGVNIIVALPPKEMEKFESLFYKFLI. 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca1g03571 190 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 12 185 - -
Seca1g03571 190 Gene3D - 1 188 IPR023213 -
Seca1g03571 190 Pfam Transferase family 2 186 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca1g03571 Seca-Chr1 103549928 103550500 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca1g03571 3 187 Monolignol Biosynthesis Gene Families AT5G48930 25.616 5.64e-15 70.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca1g03571 K13065 K15400 gmx:100780971 303.908